RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CHRNB1	P11230	501 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A6	P19224	532 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A1	P22309	533 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A4	P22310	534 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UBA1	P22314	1058 aa	Known RBP	11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A3	P35503	534 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A5	P35504	534 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	SLC18A2	Q05940	514 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	ATP1A4	Q13733	1029 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	PDE1C	Q14123	709 aa	Predicted RBP	11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.06	□□□□□ -0.64	2e-6	■■□□□ 14.2
CHD2-223	ENST00000636306	TRIM16L	Q309B1	348 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	TREML2	Q5T2D2	321 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	AGAP7P	Q5VUJ5	663 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	ANKRD13B	Q86YJ7	626 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	CHERP	Q8IWX8	916 aa	Known RBP	11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	PPM1K	Q8N3J5	372 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	FBXW8	Q8N3Y1	598 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	NLRP7	Q8WX94	980 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	C12orf43	Q96C57	262 aa	Known RBP	11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	APOPT1	Q96IL0	206 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	PWWP2A	Q96N64	755 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	TMEM117	Q9H0C3	514 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	PORCN	Q9H237	461 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	DHX33	Q9H6R0	707 aa	Known RBP	11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	VPS37B	Q9H9H4	285 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	ELP3	Q9H9T3	547 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A7	Q9HAW7	530 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A10	Q9HAW8	530 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UGT1A8	Q9HAW9	530 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	XPNPEP1	Q9NQW7	623 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	CHST7	Q9NS84	486 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	PNPLA3	Q9NST1	481 aa		11.06	□□□□□ -0.64
CHD2-223	ENST00000636306	UNCX	A6NJT0	531 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ADM5	C9JUS6	153 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SNAP91	O60641	907 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	LPXN	O60711	386 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	KRT75	O95678	551 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	CHEK2	O96017	543 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	MYCLP1	P12525	358 aa	Predicted RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	GZMA	P12544	262 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	P4HA1	P13674	534 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	BGN	P21810	368 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	KLRC2	P26717	231 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ACADSB	P45954	432 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	EFNA5	P52803	228 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	COPA	P53621	1224 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	PDIA2	Q13087	525 aa	Known RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	KCTD2	Q14681	263 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	OXA1L	Q15070	435 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	WDR44	Q5JSH3	913 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SIGIRR	Q6IA17	410 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	METTL7B	Q6UX53	244 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	AGMO	Q6ZNB7	445 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	CBWD2	Q8IUF1	395 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	CPSF7	Q8N684	471 aa	Known RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SEPT1	Q8WYJ6	367 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	BSND	Q8WZ55	320 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SHC3	Q92529	594 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	TMIGD2	Q96BF3	282 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	TAMM41	Q96BW9	452 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	CDCA5	Q96FF9	252 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	GPR88	Q9GZN0	384 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	MROH8	Q9H579	483 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	TMEM134	Q9H6X4	195 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SMYD3	Q9H7B4	428 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	TAS2R14	Q9NYV8	317 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	TMEM9	Q9P0T7	183 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SLC17A7	Q9P2U7	560 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	FZD1	Q9UP38	647 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	LOC105371267	A0A1B0GV96	52 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	GOLGA8IP	A6NC78	632 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SDR42E2	A6NKP2	422 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	GOLGA8J	A6NMD2	632 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	PRR5-ARHGAP8	B1AHC4	643 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	TRPA1	O75762	1119 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	STAMBP	O95630	424 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	MYL4	P12829	197 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	HOXD10	P28358	340 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SLC26A2	P50443	739 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	AP3M2	P53677	418 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ARHGAP8	P85298	464 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	GCNT1	Q02742	428 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	PTP4A2	Q12974	167 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	DPYS	Q14117	519 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	MORF4L2	Q15014	288 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SUZ12	Q15022	739 aa	Known RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	LSM12	Q3MHD2	195 aa	Known RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	HSF5	Q4G112	596 aa	Predicted RBP	11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	SCARA3	Q6AZY7	606 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	OGFOD2	Q6N063	350 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ZNF677	Q86XU0	584 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ZNF354C	Q86Y25	554 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ANKMY2	Q8IV38	441 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ARHGEF19	Q8IW93	802 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	ZBTB8OS	Q8IWT0	167 aa		11.05	□□□□□ -0.64
CHD2-223	ENST00000636306	FAM71A	Q8IYT1	594 aa		11.05	□□□□□ -0.64

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