RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
CLN5-208ENST00000636183 ATAT1Q5SQI0 421 aa16.45■□□□□ 0.22
CLN5-208ENST00000636183 C3orf67Q6ZVT6 689 aa16.45■□□□□ 0.22
CLN5-208ENST00000636183 MKNK1Q9BUB5 465 aa16.45■□□□□ 0.22
CLN5-208ENST00000636183 FAM220BPB1ANY3 271 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 MICAL2O94851 1124 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 GSSP48637 474 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 GUCY1A3Q02108 690 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 RCN1Q15293 331 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 C11orf88Q6PI97 169 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 REPS1Q96D71 796 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 TM6SF2Q9BZW4 377 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 A0A1B0GW55 424 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 FOXP2O15409 715 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 BAIAP3O94812 1187 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DUX4L2P0CJ85 424 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DUX4L3P0CJ86 424 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DUX4L4P0CJ87 422 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DUX4L5P0CJ88 424 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DUX4L6P0CJ89 424 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DUX4L7P0CJ90 424 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 CRYMQ14894 314 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 USP41Q3LFD5 358 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 UTP15Q8TED0 518 aaKnown RBP16.44■□□□□ 0.22
CLN5-208ENST00000636183 FAM120BQ96EK7 910 aaKnown RBP16.44■□□□□ 0.22
CLN5-208ENST00000636183 CARD9Q9H257 536 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DUX4Q9UBX2 424 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 DNMT3LQ9UJW3 386 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 SNRPD1P62314 119 aaKnown RBP16.44■□□□□ 0.22
CLN5-208ENST00000636183 DDI2Q5TDH0 399 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 RAP1GAP2Q684P5 730 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 POMZP3Q6PJE2 187 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 TUBGCP4Q9UGJ1 667 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 SEC22BO75396 215 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 GLUD1P00367 558 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 MYBL2P10244 700 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 SYN1P17600 705 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 PSMA4P25789 261 aaKnown RBP16.44■□□□□ 0.22
CLN5-208ENST00000636183 AXLP30530 894 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 MRPS6P82932 125 aaKnown RBP16.44■□□□□ 0.22
CLN5-208ENST00000636183 STX4Q12846 297 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 PLA2G4EQ3MJ16 856 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 HECTD3Q5T447 861 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 GPR135Q8IZ08 494 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 MAB21L3Q8N8X9 362 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 COPS5Q92905 334 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 TRAF2Q12933 501 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 CAMK1Q14012 370 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 ATG16L2Q8NAA4 619 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 ATP6V1C2Q8NEY4 427 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 OR2W6PQ8NHA6 318 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 ATG4AQ8WYN0 398 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 CCDC126Q96EE4 140 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 FAM111AQ96PZ2 611 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 SLC4A9Q96Q91 983 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 BPIFA3Q9BQP9 254 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 MYLK2Q9H1R3 596 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 ZNF112Q9UJU3 913 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
CLN5-208ENST00000636183 FAM25AB3EWG3 89 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 FAM25CB3EWG5 89 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 FAM25GB3EWG6 89 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 NFKB1P19838 968 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 DNAL1Q4LDG9 190 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 FAM171BQ6P995 826 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 ADGRG2Q8IZP9 1017 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 FRMD6Q96NE9 622 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 PRRG3Q9BZD7 231 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 YIPF3Q9GZM5 350 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
CLN5-208ENST00000636183 DNAJC11Q9NVH1 559 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 BARX2Q9UMQ3 279 aaPredicted RBP16.43■□□□□ 0.22
CLN5-208ENST00000636183 RPTORQ8N122 1335 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 TMEM114B3SHH9 223 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 PABPC1P11940 636 aaKnown RBP16.43■□□□□ 0.22
CLN5-208ENST00000636183 OTUD4Q01804 1114 aaKnown RBP16.43■□□□□ 0.22
CLN5-208ENST00000636183 FOXM1Q08050 763 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 FBXO22Q8NEZ5 403 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 TKTL2Q9H0I9 626 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 KCNQ5Q9NR82 932 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 A0A0B4J269 797 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 CDH16O75309 829 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 KRT6AP02538 564 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 KRT6BP04259 564 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 LGALS2P05162 132 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 RPA3P35244 121 aaPredicted RBP16.43■□□□□ 0.22
CLN5-208ENST00000636183 KRT6CP48668 564 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 NUP107P57740 925 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 TFDP3Q5H9I0 405 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 DCDC2Q9UHG0 476 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 POLG2Q9UHN1 485 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 NEDD8-MDP1E9PL57 170 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 SMIM10L2AP0DMW4 78 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 SMIM10L2BP0DMW5 78 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 WLSQ5T9L3 541 aa16.43■□□□□ 0.22
CLN5-208ENST00000636183 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms