RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 PRICKLE1Q96MT3 831 aaPredicted RBP17.62■□□□□ 0.41
LIN28B-202ENST00000635857 RPRD1AQ96P16 312 aaPredicted RBP17.62■□□□□ 0.41
LIN28B-202ENST00000635857 PHOX2BQ99453 314 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 HINFPQ9BQA5 517 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 TKTL2Q9H0I9 626 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 PIGVQ9NUD9 493 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 ABCB8Q9NUT2 735 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 C2orf42Q9NWW7 574 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 XPO7Q9UIA9 1087 aaKnown RBP17.62■□□□□ 0.41
LIN28B-202ENST00000635857 TMEM59LQ9UK28 342 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 CAPN11Q9UMQ6 739 aa17.62■□□□□ 0.41
LIN28B-202ENST00000635857 SGK1O00141 431 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 GFRA2O00451 464 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 AXIN1O15169 862 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 GFRA3O60609 400 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 ATP5BP06576 529 aaKnown RBP17.61■□□□□ 0.41
LIN28B-202ENST00000635857 PABPC1P11940 636 aaKnown RBP17.61■□□□□ 0.41
LIN28B-202ENST00000635857 POLR2EP19388 210 aaKnown RBP17.61■□□□□ 0.41
LIN28B-202ENST00000635857 PXNP49023 591 aaPredicted RBP17.61■□□□□ 0.41
LIN28B-202ENST00000635857 CXCR3P49682 368 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 MRE11P49959 708 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 SGSHP51688 502 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 RPS24P62847 133 aaKnown RBP17.61■□□□□ 0.41
LIN28B-202ENST00000635857 EIF4EBP2Q13542 120 aaPredicted RBP17.61■□□□□ 0.41
LIN28B-202ENST00000635857 GEN1Q17RS7 908 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 SPECC1LQ69YQ0 1117 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 ANO7Q6IWH7 933 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 LRRC31Q6UY01 552 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 PRR23BQ6ZRT6 265 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 CHST9Q7L1S5 443 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 MON1BQ7L1V2 547 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 PGBD3Q8N328 593 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 NT5C3BQ969T7 300 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 TRIM11Q96F44 468 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 VCPIP1Q96JH7 1222 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.61■□□□□ 0.41
LIN28B-202ENST00000635857 SIK2Q9H0K1 926 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 ZDHHC4Q9NPG8 344 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 ELOVL2Q9NXB9 296 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 PLA2G4CQ9UP65 541 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 CACNA1HO95180 2353 aa17.61■□□□□ 0.41
LIN28B-202ENST00000635857 TCRBV21S2A2A0A5A6 115 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 LILRB5O75023 590 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 PAGE1O75459 146 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 LUC7L3O95232 432 aaKnown RBP17.6■□□□□ 0.41
LIN28B-202ENST00000635857 SERPING1P05155 500 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 HNRNPLP14866 589 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■■■□□ 16
LIN28B-202ENST00000635857 GPD1P21695 349 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 HLA-FP30511 346 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 WASP42768 502 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 OXCT1P55809 520 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 ZNF571Q7Z3V5 609 aaPredicted RBP17.6■□□□□ 0.41
LIN28B-202ENST00000635857 ALYREFQ86V81 257 aaKnown RBP17.6■□□□□ 0.41
LIN28B-202ENST00000635857 MCOLN2Q8IZK6 566 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 CFAP52Q8N1V2 620 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 FIBINQ8TAL6 211 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 RXFP2Q8WXD0 754 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 PPP1R9BQ96SB3 815 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 ZNHIT6Q9NWK9 470 aaKnown RBP17.6■□□□□ 0.41
LIN28B-202ENST00000635857 VANGL2Q9ULK5 521 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 CLEC4EQ9ULY5 219 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 HS3ST4Q9Y661 456 aa17.6■□□□□ 0.41
LIN28B-202ENST00000635857 A0A1B0GVM2 712 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 PRR23AA6NEV1 266 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 TCAF2A6NFQ2 919 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 SIGLEC16A6NMB1 481 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 SYNCRIPO60506 623 aaKnown RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 GZMAP12544 262 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 SKILP12757 684 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 CASP14P31944 242 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 PTPN9P43378 593 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 ST8SIA6P61647 398 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 DMWDQ09019 674 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 PTP4A2Q12974 167 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 AUHQ13825 339 aaKnown RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 SIM2Q14190 667 aaPredicted RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 FNDC3BQ53EP0 1204 aaKnown RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 USP39Q53GS9 565 aaKnown RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 OTUD1Q5VV17 481 aaPredicted RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 SERPINA13PQ6UXR4 307 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 FAM131BQ86XD5 332 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 HMGB4Q8WW32 186 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 MCEEQ96PE7 176 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 EPC1Q9H2F5 836 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 PARVAQ9NVD7 372 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 POLR3BQ9NW08 1133 aaPredicted RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 ARHGEF38Q9NXL2 777 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 CACNA2D2Q9NY47 1150 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 KIAA1522Q9P206 1035 aaPredicted RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 THAP10Q9P2Z0 257 aaPredicted RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 EBF1Q9UH73 591 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 GMEB2Q9UKD1 530 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 SMG5Q9UPR3 1016 aaKnown RBP17.59■□□□□ 0.41
LIN28B-202ENST00000635857 SCINQ9Y6U3 715 aa17.59■□□□□ 0.41
LIN28B-202ENST00000635857 C2CD4BA6NLJ0 364 aa17.58■□□□□ 0.4
LIN28B-202ENST00000635857 RTN2O75298 545 aa17.58■□□□□ 0.4
LIN28B-202ENST00000635857 RPP40O75818 363 aaKnown RBP17.58■□□□□ 0.4
LIN28B-202ENST00000635857 GYPCP04921 128 aa17.58■□□□□ 0.4
LIN28B-202ENST00000635857 MYBL1P10243 752 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms