RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 EMC10Q5UCC4 262 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 RAP1GAP2Q684P5 730 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 FBXL22Q6P050 247 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ALKBH5Q6P6C2 394 aaKnown RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 DCUN1D2Q6PH85 259 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 STRADAQ7RTN6 431 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CHSY1Q86X52 802 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 LGI2Q8N0V4 545 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TERB1Q8NA31 727 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 SPC24Q8NBT2 197 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 HJURPQ8NCD3 748 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CCDC26Q8TAB7 109 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 USP33Q8TEY7 942 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TRIM11Q96F44 468 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 C1orf74Q96LT6 269 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 MCEEQ96PE7 176 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CNPY3Q9BT09 278 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TKTL2Q9H0I9 626 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TMPRSS4Q9NRS4 437 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 C2orf42Q9NWW7 574 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CNOT8Q9UFF9 292 aaKnown RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 RAPGEFL1Q9UHV5 662 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 STARD13Q9Y3M8 1113 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 HCN4Q9Y3Q4 1203 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ARIH1Q9Y4X5 557 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 HS3ST4Q9Y661 456 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CACNA1HO95180 2353 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 MYO18AQ92614 2054 aaKnown RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ANKRD62A6NC57 917 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 F5H5T6 163 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 LAMTOR5O43504 91 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ATG13O75143 517 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 HLA-FP30511 346 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CXCL12P48061 93 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 MRPS21P82921 87 aaKnown RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 OGDHQ02218 1023 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 GFPT1Q06210 699 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 AUHQ13825 339 aaKnown RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CDO1Q16878 200 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 C5orf22Q49AR2 442 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 C2orf27AQ580R0 203 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 C10orf76Q5T2E6 689 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ARTNQ5T4W7 220 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ACBD5Q5T8D3 534 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 NUDT18Q6ZVK8 323 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 KIAA0907Q7Z7F0 614 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 C14orf80Q86SX3 495 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 FAM131BQ86XD5 332 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF683Q8IZ20 524 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 CFAP52Q8N1V2 620 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 RPLP0P6Q8NHW5 317 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 FIBINQ8TAL6 211 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 FAM172AQ8WUF8 416 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF653Q96CK0 615 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 LMLNQ96KR4 655 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 SIK2Q9H0K1 926 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 NHEJ1Q9H9Q4 299 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 PRMT8Q9NR22 394 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 STIM2Q9P246 746 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 H0Y858 1186 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 CCP110O43303 1012 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 PAPSS2O95340 614 aaPredicted RBP10.06□□□□□ -0.8
LINC00339-210ENST00000635675 CYP1A2P05177 515 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 TDGF1P13385 188 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 ADRA1BP35368 520 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 CCR3P51677 355 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 GALCP54803 685 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 SEC13P55735 322 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 SATB1Q01826 763 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF252P-AS1Q0IIN9 211 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 GEN1Q17RS7 908 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 SYT13Q7L8C5 426 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF557Q8N988 423 aaPredicted RBP10.06□□□□□ -0.8
LINC00339-210ENST00000635675 IL17RCQ8NAC3 791 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 WFDC5Q8TCV5 224 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 FNIP1Q8TF40 1166 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 IGSF8Q969P0 613 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 NTAN1Q96AB6 310 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 CCDC42Q96M95 316 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 TRIM7Q9C029 511 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 THAP2Q9H0W7 228 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 MRPL47Q9HD33 250 aaKnown RBP10.06□□□□□ -0.8
LINC00339-210ENST00000635675 MYO1AQ9UBC5 1043 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 FBXO4Q9UKT5 387 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 VANGL2Q9ULK5 521 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 SNX10Q9Y5X0 201 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 SCINQ9Y6U3 715 aa10.06□□□□□ -0.8
LINC00339-210ENST00000635675 TYW5A2RUC4 315 aaKnown RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 DRGXA6NNA5 263 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 K7ESF4 209 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 TIMM44O43615 452 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 AKR1B10O60218 316 aa10.05□□□□□ -0.8
LINC00339-210ENST00000635675 LUC7L3O95232 432 aaKnown RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 PTMAP06454 111 aaKnown RBP10.05□□□□□ -0.8
LINC00339-210ENST00000635675 HNRNPLP14866 589 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 242.4 ms