RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 NUP58Q9BVL2 599 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 ZDHHC5Q9C0B5 715 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 GAREM1Q9H706 876 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 IL21RQ9HBE5 538 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 SIX2Q9NPC8 291 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 MARCH2Q9P0N8 246 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 USP36Q9P275 1121 aaKnown RBP16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 STRIP2Q9ULQ0 834 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 CLEC4EQ9ULY5 219 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 CNTN6Q9UQ52 1028 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 APOBEC2Q9Y235 224 aaKnown RBP16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 USP3Q9Y6I4 520 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 METTL12A8MUP2 240 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 RNF225M0QZC1 329 aaPredicted RBP16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 O00370 1275 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 NPC1O15118 1278 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 BCAT2O15382 392 aaPredicted RBP16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 BRD2P25440 801 aaKnown RBP16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 OXTRP30559 389 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 BST2Q10589 180 aaKnown RBP16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 FILIP1LQ4L180 1135 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 KLHDC7AQ5VTJ3 777 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 SERPINA13PQ6UXR4 307 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 ANKS1BQ7Z6G8 1248 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 LUZP1Q86V48 1076 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 CADM4Q8NFZ8 388 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 ADAMTS14Q8WXS8 1223 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 SHC3Q92529 594 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 SNX19Q92543 992 aa16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 PIWIL1Q96J94 861 aaKnown RBP16.21■□□□□ 0.19
SNRNP48-203ENST00000634363 PLXNB3Q9ULL4 1909 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 LRRC10BA6NIK2 292 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 M0QYV0 167 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 MED7O43513 233 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 TSPAN3O60637 253 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 SETSIPP0DME0 302 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 HLA-EP13747 358 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 UCHL3P15374 230 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 PRKCHP24723 683 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 GNA15P30679 374 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 MATKP42679 507 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 YWHAGP61981 247 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 SYCP1Q15431 976 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 SMYD5Q6GMV2 418 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 SLCO6A1Q86UG4 719 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 PROSER1Q86XN7 944 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 ARHGAP18Q8N392 663 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 TFAP2BQ92481 460 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 NDRG1Q92597 394 aaKnown RBP16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 TSPY26PQ9H489 355 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 PLCB1Q9NQ66 1216 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 TM7SF3Q9NS93 570 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 FAM207AQ9NSI2 230 aaPredicted RBP16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 PCOLCE2Q9UKZ9 415 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 FHOD1Q9Y613 1164 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 ASPMQ8IZT6 3477 aa16.2■□□□□ 0.18
SNRNP48-203ENST00000634363 ADAMTS20P59510 1910 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 GOLGA8CPA6NN73 597 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 XPO1O14980 1071 aaKnown RBP16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 THAP12O43422 761 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 TIMM44O43615 452 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 CER1O95813 267 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 SERPINC1P01008 464 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 CSNK1EP49674 416 aaKnown RBP16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 TKTL1P51854 596 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 COPAP53621 1224 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 PDE4CQ08493 712 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 ENPP2Q13822 863 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 E2F5Q15329 346 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 CNGA2Q16280 664 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 HLA-BQ31612 363 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 TMEM215Q68D42 235 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 LCLAT1Q6UWP7 414 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 PIGZQ86VD9 579 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 UBA3Q8TBC4 463 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 RHBDD1Q8TEB9 315 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 CCDC86Q9H6F5 360 aaKnown RBP16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 LRRC4Q9HBW1 653 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 AJAP1Q9UKB5 411 aaPredicted RBP16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 DAAM1Q9Y4D1 1078 aa16.19■□□□□ 0.18
SNRNP48-203ENST00000634363 PTPRBP23467 1997 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 A0A1B0GVT2 93 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 CALCAP01258 141 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 KLK7P49862 253 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 PTK2Q05397 1052 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 DRAP1Q14919 205 aaPredicted RBP16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 EIF4HQ15056 248 aaKnown RBP16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 FNDC3BQ53EP0 1204 aaKnown RBP16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 IL27RAQ6UWB1 636 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 CPXM2Q8N436 756 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 ZNF366Q8N895 744 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 NEK11Q8NG66 645 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 CYB5D2Q8WUJ1 264 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 ERGIC2Q96RQ1 377 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 SLC2A11Q9BYW1 496 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 UBXN6Q9BZV1 441 aa16.18■□□□□ 0.18
SNRNP48-203ENST00000634363 GANQ9H2C0 597 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms