RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ASIC1P78348 528 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 PDIA5Q14554 519 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TERF2Q15554 542 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 WHAMMP3Q1A5X7 153 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 MAP9Q49MG5 647 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ZC2HC1CQ53FD0 456 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 HYIQ5T013 277 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TEX35Q5T0J7 233 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 UNC13DQ70J99 1090 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 NLRC3Q7RTR2 1065 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CREBRFQ8IUR6 639 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 FAM114A1Q8IWE2 563 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CMTM8Q8IZV2 173 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 THEM5Q8N1Q8 247 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CCDC33Q8N5R6 958 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CSGALNACT2Q8N6G5 542 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CEP112Q8N8E3 955 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CCDC47Q96A33 483 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 NAPGQ99747 312 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 REEP2Q9BRK0 252 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 NUP58Q9BVL2 599 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TRIM8Q9BZR9 551 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ANKZF1Q9H8Y5 726 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 OSGEPQ9NPF4 335 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 RP1L1Q8IWN7 2480 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CCDC151A5D8V7 595 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ANTXRLA6NF34 631 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 MYMKA6NI61 221 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 C1QTNF9BB2RNN3 333 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 PATE3B3GLJ2 98 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 OGTO15294 1046 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TOP3BO95985 862 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 C1QTNF9P0C862 333 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 MYCLP1P12525 358 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 PROZP22891 400 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CDC25CP30307 473 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 HNRNPH3P31942 346 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 GNALP38405 381 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TUBB4BP68371 445 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 RUNX3Q13761 415 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TRIM61Q5EBN2 209 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 XKR4Q5GH76 650 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 FAM209AQ5JX71 171 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 C9orf57Q5W0N0 161 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 LMBRD2Q68DH5 695 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 DYMQ7RTS9 669 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 SYT9Q86SS6 491 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 LRRTM3Q86VH5 581 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 RLN3Q8WXF3 142 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 POMGNT1Q8WZA1 660 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 PIGKQ92643 395 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 RAD54LQ92698 747 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 IQCDQ96DY2 449 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CALML4Q96GE6 196 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 PARD6BQ9BYG5 372 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 EPN3Q9H201 632 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TRIM39Q9HCM9 518 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TDP1Q9NUW8 608 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 SMPD4Q9NXE4 827 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 MAGEC2Q9UBF1 373 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 LUC7L2Q9Y383 392 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 LOC400499M0QZD8 3231 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 M0QZQ0 153 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 SEC31AO94979 1220 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 KIF20AO95235 890 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 POU3F2P20265 443 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CYP2F1P24903 491 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CNR2P34972 360 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 GRIA2P42262 883 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 IFNAR2P48551 515 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 GALK1P51570 392 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 EPHA5P54756 1037 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ZBED6P86452 979 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TSPY1Q01534 308 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 BRD3Q15059 726 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ZCWPW2Q504Y3 356 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ZPBP2Q6X784 338 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TRAPPC11Q7Z392 1133 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 GUF1Q8N442 669 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 DEFB119Q8N690 84 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 UBR7Q8N806 425 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TSTD1Q8NFU3 115 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 GAB3Q8WWW8 586 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 DDX1Q92499 740 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 LARP4BQ92615 738 aaKnown RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 USP13Q92995 863 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 RELTQ969Z4 430 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 SAAL1Q96ER3 474 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 FUT8Q9BYC5 575 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 HAUS4Q9H6D7 363 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TRPV4Q9HBA0 871 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 GTF3C4Q9UKN8 822 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TBX20Q9UMR3 447 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 MAPRE3Q9UPY8 281 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 SIK3Q9Y2K2 1263 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ASB3Q9Y575 518 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 MAST4O15021 2626 aa5.09□□□□□ -1.59
LINC00550-201ENST00000629293 GOLGA8IPA6NC78 632 aa5.09□□□□□ -1.59
LINC00550-201ENST00000629293 GOLGA8JA6NMD2 632 aa5.09□□□□□ -1.59
LINC00550-201ENST00000629293 EIF3CLB5ME19 914 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms