RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SKA2Q8WVK7 121 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 RMDN1Q96DB5 314 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 SERAC1Q96JX3 654 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 AGAP2Q99490 1192 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 ROPN1BQ9BZX4 212 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 RNF208Q9H0X6 261 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 ROPN1Q9HAT0 212 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 CHRAC1Q9NRG0 131 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 TLK1Q9UKI8 766 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 A0A0U1RQS6 177 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 MEI4A8MW99 385 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ZBTB24O43167 697 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 PRKCGP05129 697 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ITGAVP06756 1048 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ODC1P11926 461 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 MATKP42679 507 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 PEX6Q13608 980 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 OASLQ15646 514 aaKnown RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 CYP1B1Q16678 543 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 RFWD3Q6PCD5 774 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 STRA8Q7Z7C7 330 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 CHSY1Q86X52 802 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 PQLC3Q8N755 202 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 OR6K2Q8NGY2 324 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 KBTBD7Q8WVZ9 684 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 MCRS1Q96EZ8 462 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 NDNQ99608 321 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 DUSP16Q9BY84 665 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SP110Q9HB58 689 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ARHGEF4Q9NR80 690 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 RBM22Q9NW64 420 aaKnown RBP eCLIP7.72□□□□□ -1.179e-7■■□□□ 14.3
PKP4-217ENST00000628904 SYBUQ9NX95 663 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SHOC2Q9UQ13 582 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ATP11BQ9Y2G3 1177 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 PPP1R12AO14974 1030 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 URB1O60287 2271 aaKnown RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 MGEA5O60502 916 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 CLUHO75153 1309 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ZBTB48P10074 688 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 SERPINB3P29508 390 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 PNPLA4P41247 253 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 NME5P56597 212 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SREBF2Q12772 1141 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 USP10Q14694 798 aaKnown RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 STILQ15468 1287 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SNCBQ16143 134 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 RAP1GAP2Q684P5 730 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 PRSS55Q6UWB4 352 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 AGMOQ6ZNB7 445 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 TRABD2AQ86V40 505 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SNX31Q8N9S9 440 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SLC35B2Q8TB61 432 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 NSMCE1Q8WV22 266 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 NUP205Q92621 2012 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 FBXO32Q969P5 355 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 MARK4Q96L34 752 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 FICDQ9BVA6 458 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ABCG8Q9H221 673 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 ARL2BPQ9Y2Y0 163 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 KIAA1217Q5T5P2 1943 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 PMM2O15305 246 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SNX3O60493 162 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 LRIG2O94898 1065 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 HSPA4LO95757 839 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SNRPAP09012 282 aaKnown RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 CTGFP29279 349 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 L1CAMP32004 1257 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 MSX2P35548 267 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 CASP2P42575 452 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 NSUN2Q08J23 767 aaKnown RBP eCLIP7.72□□□□□ -1.17
PKP4-217ENST00000628904 TSTA3Q13630 321 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 UNC5AQ6ZN44 842 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 CEP128Q6ZU80 1094 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 SDCCAG8Q86SQ7 713 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 TTC7BQ86TV6 843 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 TRPV1Q8NER1 839 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 RFWD2Q8NHY2 731 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 GTF3C2Q8WUA4 911 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 ZNF75CPQ92670 426 aaPredicted RBP7.72□□□□□ -1.17
PKP4-217ENST00000628904 TASP1Q9H6P5 420 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 TMLHEQ9NVH6 421 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 CRYL1Q9Y2S2 319 aa7.72□□□□□ -1.17
PKP4-217ENST00000628904 NCF1BA6NI72 391 aaPredicted RBP7.71□□□□□ -1.17
PKP4-217ENST00000628904 NCF1CA8MVU1 366 aaPredicted RBP7.71□□□□□ -1.17
PKP4-217ENST00000628904 GYG2O15488 501 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 SKAP2O75563 359 aaPredicted RBP7.71□□□□□ -1.17
PKP4-217ENST00000628904 GSTA1P08263 222 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 GSTA2P09210 222 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 CSH1P0DML2 217 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 CSH2P0DML3 217 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 NCF1P14598 390 aaPredicted RBP7.71□□□□□ -1.17
PKP4-217ENST00000628904 ACADSBP45954 432 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 COPS2P61201 443 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 ITGA9Q13797 1035 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 PRPSAP1Q14558 356 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 PDK1Q15118 436 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 PDK2Q15119 407 aa7.71□□□□□ -1.17
PKP4-217ENST00000628904 KYAT1Q16773 422 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms