RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ATL2Q8NHH9 583 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 MRPL38Q96DV4 380 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 CPQQ9Y646 472 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 ADCY2Q08462 1091 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 KIAA0319Q5VV43 1072 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC8B1Q6J4K2 584 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC35F5Q8WV83 523 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 SFXN1Q9H9B4 322 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 VANGL2Q9ULK5 521 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 RHOP08100 348 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 MAGEA9P43362 315 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 RECQLP46063 649 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 DAB2IPQ5VWQ8 1189 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 HS6ST3Q8IZP7 471 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZNF473Q8WTR7 871 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 SEMA4AQ9H3S1 761 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 SP110Q9HB58 689 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 TCRBV5S1A1TA0A578 114 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 SGK1O00141 431 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 MAP3K6O95382 1288 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 MIPP30301 263 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 KCNJ1P48048 391 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZNF132P52740 706 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 RABGAP1LQ5R372 815 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 TFAP2DQ7Z6R9 452 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 CCT8L2Q96SF2 557 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 DCLK3Q9C098 648 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 FBXL21Q9UKT6 434 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 PSTPIP1O43586 416 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 PMS2P54278 862 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 QPCTQ16769 361 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 NLRP14Q86W24 1093 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 CSGALNACT1Q8TDX6 532 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 DQX1Q8TE96 717 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 GANCQ8TET4 914 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 FOXP3Q9BZS1 431 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 CCSER2Q9H7U1 834 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 FNIP2Q9P278 1114 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 SEC24AO95486 1093 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 FAM107AO95990 144 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 TEAD2Q15562 447 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 RAP1GAP2Q684P5 730 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZC3H18Q86VM9 953 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 CLP1Q92989 425 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 CYP2S1Q96SQ9 504 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 CATSPERBQ9H7T0 1116 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 BRD9Q9H8M2 597 aa12.85□□□□□ -0.35
SYNGAP1-207ENST00000628646 SERPINB6P35237 376 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZNF143P52747 638 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 RNF187Q5TA31 235 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC26A9Q7LBE3 791 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 PACS2Q86VP3 889 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 TCEAL8Q8IYN2 117 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 PGM2Q96G03 612 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 CIPCQ9C0C6 399 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 DAB1O75553 588 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 ITIH2P19823 946 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 PHBP35232 272 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 PPP2R2AP63151 447 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 HFE2Q6ZVN8 426 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 BZW1Q7L1Q6 419 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 PABPC5Q96DU9 382 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 XPAP23025 273 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 MAGOHP61326 146 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC29A2Q14542 456 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 FAM171BQ6P995 826 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 Q7L0L9 218 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 GPRIN1Q7Z2K8 1008 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 CCDC33Q8N5R6 958 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 KCNK9Q9NPC2 374 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 HCFC1R1Q9NWW0 138 aa12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 R3HDM2Q9Y2K5 976 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC9A3R1O14745 358 aaPredicted RBP12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 APOL1O14791 398 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 AP1B1Q10567 949 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 RSPO2Q6UXX9 243 aaPredicted RBP12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 ATXN2LQ8WWM7 1075 aaKnown RBP12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 IRGQQ8WZA9 623 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 MMP13P45452 471 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms