RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 RNF43Q68DV7 783 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 GRAMD4Q6IC98 578 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 PPP1R2P3Q6NXS1 205 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 RSRC2Q7L4I2 434 aaKnown RBP8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 TMEM110Q86TL2 294 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 ADIPOR2Q86V24 386 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 VPS36Q86VN1 386 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 ZNF276Q8N554 614 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 EMC1Q8N766 993 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 ZNF513Q8N8E2 541 aaPredicted RBP8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 MSANTD4Q8NCY6 345 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 SLC30A5Q8TAD4 765 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 STK32AQ8WU08 396 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 GAB3Q8WWW8 586 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 ATRIPQ8WXE1 791 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 CPA5Q8WXQ8 436 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 IGSF8Q969P0 613 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 MSANTD3Q96H12 275 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 MKRN2Q9H000 416 aaKnown RBP8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 ARRDC1-AS1Q9H2J1 176 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 HAUS4Q9H6D7 363 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 CNGB3Q9NQW8 809 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 ABHD10Q9NUJ1 306 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 TAS2R14Q9NYV8 317 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 STIM2Q9P246 746 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 ACTL7AQ9Y615 435 aa8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 TDRD6O60522 2096 aaKnown RBP8.4□□□□□ -1.06
SPTAN1-213ENST00000627809 MAP1BP46821 2468 aaKnown RBP8.4□□□□□ -1.07
SPTAN1-213ENST00000627809 PCNX2A6NKB5 2137 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 TBC1D3BA6NDS4 549 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 PLK4O00444 970 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 IRAK2O43187 625 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 RPP40O75818 363 aaKnown RBP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 FBXO21O94952 628 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 CYP1A1P04798 512 aaPredicted RBP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 APODP05090 189 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 RALAP11233 206 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 GRIA2P42262 883 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 DGKGP49619 791 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 STK19P49842 368 aaPredicted RBP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 COPAP53621 1224 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 NOMO3P69849 1222 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 LMAN2Q12907 356 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 ZNF234Q14588 700 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 RSPO4Q2I0M5 234 aaPredicted RBP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 NAA35Q5VZE5 725 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 RAP1GAP2Q684P5 730 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 HGSNATQ68CP4 663 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 ZC3H14Q6PJT7 736 aaKnown RBP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 DDX42Q86XP3 938 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 CPNE8Q86YQ8 564 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 SLC41A1Q8IVJ1 513 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 TMEFF1Q8IYR6 380 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 APCDD1Q8J025 514 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 SCML4Q8N228 414 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 TC2NQ8N9U0 490 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 SPC24Q8NBT2 197 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 JOSD2Q8TAC2 188 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 RUBCNQ92622 972 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 FAM149B1Q96BN6 582 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 PPP1R13BQ96KQ4 1090 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 SLC2A13Q96QE2 648 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 PRMT1Q99873 361 aaKnown RBP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 HINFPQ9BQA5 517 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 PIGVQ9NUD9 493 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 ABCB8Q9NUT2 735 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 SEPT11Q9NVA2 429 aaKnown RBP8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 TBC1D14Q9P2M4 693 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 DEC1Q9P2X7 70 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 SERGEFQ9UGK8 458 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 SLC8A2Q9UPR5 921 aa8.39□□□□□ -1.07
SPTAN1-213ENST00000627809 CABIN1Q9Y6J0 2220 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 SSU72P8A0A1W2PR75 194 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 GOLGA8SH3BPF8 625 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 SLC9A3R1O14745 358 aaPredicted RBP8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 ATMINO43313 823 aaPredicted RBP8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 ACSL4O60488 711 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 TBL1XO60907 577 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 CNTN5O94779 1100 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 APBB3O95704 486 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 TRUB2O95900 331 aaKnown RBP8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 GZMAP12544 262 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 UNGP13051 313 aaPredicted RBP8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 HOXB2P14652 356 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 MAOBP27338 520 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 HOXA6P31267 233 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 GABRB2P47870 512 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 PSEN1P49768 467 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 TBX4P57082 545 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 GSDMDP57764 484 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 CDK17Q00537 523 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 GOLGA8FQ08AF8 430 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 GOLGA8DPQ0D2H9 430 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 MAPK8IP2Q13387 824 aaPredicted RBP8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 CLEC16AQ2KHT3 1053 aa8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 C15orf59Q2T9L4 293 aaPredicted RBP8.38□□□□□ -1.07
SPTAN1-213ENST00000627809 ALFQ53S48 1182 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms