RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 C12orf29Q8N999 325 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 GSDMBQ8TAX9 411 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ZNF570Q96NI8 536 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 SLC2A13Q96QE2 648 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 KCTD15Q96SI1 283 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 GCOM2Q9BZD3 368 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.39□□□□□ -1.234e-11■■□□□ 12
CTNNA1-244ENST00000627109 XAB2Q9HCS7 855 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 PCDH10Q9P2E7 1040 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 RAD54BQ9Y620 910 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 MYLKQ15746 1914 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 RRN3P2A6NIE6 340 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 VTNP04004 478 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 PRKCGP05129 697 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 SNRPAP09012 282 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 WARSP23381 471 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 CYP2F1P24903 491 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 CDC25CP30307 473 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 SERPINB9P50453 376 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 AIF1P55008 147 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 PAFAH1B3Q15102 231 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 TAF1BQ53T94 588 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 LRRC6Q86X45 466 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 DEPDC4Q8N2C3 294 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 PPM1NQ8N819 430 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 SLC7A14Q8TBB6 771 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 GLT1D1Q96MS3 346 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 CSPG4P5Q96PW8 444 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 APOL6Q9BWW8 343 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 TSSK1BQ9BXA7 367 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 C9IYK1 514 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 H3BRB1 525 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 PPEF2O14830 753 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 SEPT4O43236 478 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 DAB1O75553 588 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 METTL18O95568 372 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 F2P00734 622 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 CD53P19397 219 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 TFE3P19532 575 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 CALB2P22676 271 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 SDC4P31431 198 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 FDFT1P37268 417 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 RAP1GDS1P52306 607 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 BCAT1P54687 386 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 PRMT2P55345 433 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 GJA9P57773 515 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 SCAPQ12770 1279 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 FSCN1Q16658 493 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 UBXN11Q5T124 520 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 IQSEC1Q6DN90 963 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 LRRC8BQ6P9F7 803 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 CCNJLQ8IV13 435 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 TRIM42Q8IWZ5 723 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 VPS52Q8N1B4 723 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 ARRDC4Q8NCT1 418 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 NSMCE1Q8WV22 266 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 ARNTL2Q8WYA1 636 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 MCUR1Q96AQ8 359 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 PGAP3Q96FM1 320 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 SRPK1Q96SB4 655 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 GORASP1Q9BQQ3 440 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 FAM167BQ9BTA0 163 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 SLC13A1Q9BZW2 595 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 FAM49AQ9H0Q0 323 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 CXorf56Q9H5V9 222 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 STN1Q9H668 368 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 TUT1Q9H6E5 874 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 BATF3Q9NR55 127 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 DTLQ9NZJ0 730 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 CCDC195A0A1B0GUA6 201 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 XPO1O14980 1071 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 KCNN4O15554 427 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 AVILO75366 819 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 CSH1P0DML2 217 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 CSH2P0DML3 217 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 VAV1P15498 845 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 LRPAP1P30533 357 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 BCAR1P56945 870 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 TUBB3Q13509 450 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 DPYSQ14117 519 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 NBPF20Q3BBV1 942 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 RFX8Q6ZV50 586 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 SNX32Q86XE0 403 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 KIF12Q96FN5 646 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 TRIM55Q9BYV6 548 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 RSPH9Q9H1X1 276 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 C1orf21Q9H246 121 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 RAB6BQ9NRW1 208 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 RNF19AQ9NV58 838 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.38□□□□□ -1.235e-6■■■□□ 15.4
CTNNA1-244ENST00000627109 GPATCH2LQ9NWQ4 482 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 TUBGCP4Q9UGJ1 667 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 ZFP69BQ9UJL9 534 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 MAGED2Q9UNF1 606 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 PLA2G4CQ9UP65 541 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 BRCA2P51587 3418 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 GABRDO14764 452 aa7.38□□□□□ -1.23
CTNNA1-244ENST00000627109 ADCY6O43306 1168 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms