RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 AZIN2Q96A70 460 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 ZFYVE19Q96K21 471 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 HAPLN3Q96S86 360 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 RPP25Q9BUL9 199 aaKnown RBP8.81□□□□□ -1
SGMS1-211ENST00000626236 MAGEB5Q9BZ81 275 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 THG1LQ9NWX6 298 aaKnown RBP8.81□□□□□ -1
SGMS1-211ENST00000626236 DUS2Q9NX74 493 aaKnown RBP8.81□□□□□ -1
SGMS1-211ENST00000626236 TBC1D14Q9P2M4 693 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 OR12D3Q9UGF7 316 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 LIMD1Q9UGP4 676 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.81□□□□□ -1
SGMS1-211ENST00000626236 MIA3Q5JRA6 1907 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 COL4A3Q01955 1670 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 UNC80Q8N2C7 3258 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 DOCK4Q8N1I0 1966 aa8.81□□□□□ -1
SGMS1-211ENST00000626236 CCDC66A2RUB6 948 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 MIF4GDA9UHW6 222 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 LOC730098B7Z3J9 87 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 F5H5T6 163 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 PI4K2BG5E9Z4 385 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 TRDMT1O14717 391 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 SLC9A3R1O14745 358 aaPredicted RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 CREB3O43889 395 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 TSPAN3O60637 253 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 SRGAP2O75044 1071 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 KRT1P04264 644 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 TACR2P21452 398 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 CTNNA2P26232 953 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 GDI1P31150 447 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 CTNNA1P35221 906 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 CHKAP35790 457 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 CDH6P55285 790 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 FCHO2Q0JRZ9 810 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 AUHQ13825 339 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 ADGRF1Q5T601 910 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 LRRC38Q5VT99 294 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 TRIM68Q6AZZ1 485 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 LRRC31Q6UY01 552 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 TPGS1Q6ZTW0 290 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 C14orf80Q86SX3 495 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 PSTKQ8IV42 348 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 ADHFE1Q8IWW8 467 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 FAM217AQ8IXS0 508 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 LGI2Q8N0V4 545 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 UBL4BQ8N7F7 174 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 KCTD6Q8NC69 237 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 DEPDC1BQ8WUY9 529 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 ATXN2LQ8WWM7 1075 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 KRT35Q92764 455 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 CD101Q93033 1021 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 ASIC4Q96FT7 647 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 HES6Q96HZ4 224 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 C1orf74Q96LT6 269 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 C16orf45Q96MC5 204 aaPredicted RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 KCTD15Q96SI1 283 aaPredicted RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 PRMT1Q99873 361 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 DDX50Q9BQ39 737 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 TRMT61BQ9BVS5 477 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 OSBPL2Q9H1P3 480 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 LINC00597Q9H2U6 94 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 EBF3Q9H4W6 596 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 KCNK12Q9HB15 430 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 DDX56Q9NY93 547 aaKnown RBP8.8□□□□□ -1
SGMS1-211ENST00000626236 PRKAG3Q9UGI9 489 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 STOML2Q9UJZ1 356 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 VANGL2Q9ULK5 521 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 PCDHA3Q9Y5H8 950 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 KIAA1549LQ6ZVL6 1849 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 COL4A2P08572 1712 aa8.8□□□□□ -1
SGMS1-211ENST00000626236 MYOFQ9NZM1 2061 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 TYW5A2RUC4 315 aaKnown RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 LRRD1A4D1F6 860 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 E9PAM4 449 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 FAM72CH0Y354 149 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 EEF2KO00418 725 aaKnown RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 ENC1O14682 589 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 DDX3YO15523 660 aaKnown RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 NFATC1O95644 943 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 ASGR2P07307 311 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 CD48P09326 243 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 ARSAP15289 507 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 GOT1P17174 413 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 L1CAMP32004 1257 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 SGSHP51688 502 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 MLLT6P55198 1093 aaPredicted RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 RWDD2BP57060 319 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 TPI1P60174 286 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 ZP2Q05996 745 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 PDGFRLQ15198 375 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 RPS6KA1Q15418 735 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 DPYSL2Q16555 572 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 ANO4Q32M45 955 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 EML3Q32P44 896 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 RABGAP1LQ5R372 815 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 ACBD5Q5T8D3 534 aaPredicted RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 FAM72AQ5TYM5 149 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 FAM72DQ6L9T8 149 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 RWDD4Q6NW29 188 aaKnown RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 FBXL22Q6P050 247 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 FAM72BQ86X60 149 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms