RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PAPSS2O95340 614 aaPredicted RBP6.69□□□□□ -1.34
TCF4-249ENST00000625716 GHRHP01286 108 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 CYBBP04839 570 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 HMBSP08397 361 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 CNR2P34972 360 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 CHKAP35790 457 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 EIF2DP41214 584 aaKnown RBP6.69□□□□□ -1.34
TCF4-249ENST00000625716 GRIA2P42262 883 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 SLC6A11P48066 632 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 FNTBP49356 437 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 PGFP49763 221 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 KDSRQ06136 332 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ADIGQ0VDE8 80 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 MAN2A1Q16706 1144 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ARHGAP44Q17R89 818 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 DPCR1Q3MIW9 517 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 RAB41Q5JT25 222 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 LY6G5CQ5SRR4 150 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 PM20D1Q6GTS8 502 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 TRIM65Q6PJ69 517 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 PRR23CQ6ZRP0 262 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 PRR23BQ6ZRT6 265 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 TPGS1Q6ZTW0 290 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 CEP68Q76N32 757 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 SCD5Q86SK9 330 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 LONP2Q86WA8 852 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 TTC30AQ86WT1 665 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 BBS7Q8IWZ6 715 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 CAMKK1Q8N5S9 505 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 UBR7Q8N806 425 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 NAT16Q8N8M0 369 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ZBTB44Q8NCP5 570 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 GALNT11Q8NCW6 608 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ANKRD20A12PQ8NF67 263 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 RPLP0P6Q8NHW5 317 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 KCTD13Q8WZ19 329 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 RUBCNQ92622 972 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 KAT5Q92993 513 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 CRACR2AQ9BSW2 395 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 BBS2Q9BXC9 721 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ULBP1Q9BZM6 244 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 AKTIPQ9H8T0 292 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 FBRSL1Q9HCM7 1045 aaKnown RBP6.69□□□□□ -1.34
TCF4-249ENST00000625716 CNGB3Q9NQW8 809 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ARHGEF4Q9NR80 690 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 SPHK2Q9NRA0 654 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ST7Q9NRC1 585 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 ABCC13Q9NSE7 274 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 OSER1Q9NX31 292 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 MARCH2Q9P0N8 246 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 DEC1Q9P2X7 70 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 GMEB2Q9UKD1 530 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.69□□□□□ -1.34
TCF4-249ENST00000625716 MIA3Q5JRA6 1907 aa6.69□□□□□ -1.34
TCF4-249ENST00000625716 MUC6Q6W4X9 2439 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 COL4A2P08572 1712 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SLC12A8A0AV02 714 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 GTPBP10A4D1E9 387 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 KCNJ18B7U540 433 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 NEDD8-MDP1E9PL57 170 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SART1O43290 800 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 KAT7O95251 611 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 MBD3O95983 291 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SLC9A1P19634 815 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 EEF1GP26641 437 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 GNA15P30679 374 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 OPRD1P41143 372 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 TNFRSF4P43489 277 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 ACADSBP45954 432 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 HARS2P49590 506 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 RGS7P49802 495 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SNX16P57768 344 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 MRPS21P82921 87 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 ATP11AP98196 1134 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SIM2Q14190 667 aaPredicted RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 KCNJ12Q14500 433 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 VWA3BQ502W6 1294 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 HSP90AA4PQ58FG1 418 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 BSPRYQ5W0U4 402 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 NAIF1Q69YI7 327 aaPredicted RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 GRAMD4Q6IC98 578 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SDE2Q6IQ49 451 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 PMF1Q6P1K2 205 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 Q6ZS46 218 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SYT13Q7L8C5 426 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 TRMT11Q7Z4G4 463 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 TMEM25Q86YD3 366 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 DENND1CQ8IV53 801 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SCML4Q8N228 414 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 TSTD1Q8NFU3 115 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 USP33Q8TEY7 942 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 IRGQQ8WZA9 623 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 TFAP2BQ92481 460 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 EDEM1Q92611 657 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 NELL1Q92832 810 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 HSFY1Q96LI6 401 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 KREMEN1Q96MU8 473 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 NOX5Q96PH1 765 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 TUBGCP2Q9BSJ2 902 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms