RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 C9orf57Q5W0N0 161 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 C10orf107Q8IVU9 208 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 DEFB106AQ8N104 65 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 POU5F2Q8N7G0 328 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 CCNYQ8ND76 341 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ACMSDQ8TDX5 336 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 PPP1R13LQ8WUF5 828 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 KBTBD7Q8WVZ9 684 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ATP2A3Q93084 1043 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ANGPTL2Q9UKU9 493 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 FZD10Q9ULW2 581 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ATP5BP06576 529 aaKnown RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 ERVK-10P10266 1014 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 PGAM1P18669 254 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 AOC1P19801 751 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 AKAP5P24588 427 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 OLIG2Q13516 323 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 LBRQ14739 615 aaKnown RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 RSPH3Q86UC2 560 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 MYLK4Q86YV6 388 aaPredicted RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 ANKRD13AQ8IZ07 590 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 LRRC52Q8N7C0 313 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 TTC1Q99614 292 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ZNF184Q99676 751 aaPredicted RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 FAM49AQ9H0Q0 323 aaPredicted RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 PNPOQ9NVS9 261 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 KCNH4Q9UQ05 1017 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 APOBEC2Q9Y235 224 aaKnown RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 DERAQ9Y315 318 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 COL1A2P08123 1366 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 CITO14578 2027 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 PRKCGP05129 697 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 CYP2C8P10632 490 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 SP100P23497 879 aaPredicted RBP11.57□□□□□ -0.56
VARS2-213ENST00000625423 CPOXP36551 454 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 MLH1P40692 756 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 GRIK3Q13003 919 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 SLC27A1Q6PCB7 646 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 STRADAQ7RTN6 431 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 CATSPER4Q7RTX7 472 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 MAVSQ7Z434 540 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 RASSF3Q86WH2 238 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 TP53INP2Q8IXH6 220 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 HACE1Q8IYU2 909 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 NME8Q8N427 588 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 PGBD4Q96DM1 585 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 C1orf21Q9H246 121 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 NXF3Q9H4D5 531 aaKnown RBP11.57□□□□□ -0.56
VARS2-213ENST00000625423 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 ZNF358Q9NW07 568 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 TMEM216Q9P0N5 145 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 DCDC2Q9UHG0 476 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 SOX13Q9UN79 622 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 CCDC189A1A4V9 331 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 ENO4A6NNW6 628 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 SPTLC1O15269 473 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 MAP3K13O43283 966 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 CREB3O43889 395 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 BAG2O95816 211 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 ARRB2P32121 409 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 MATKP42679 507 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 DBN1Q16643 649 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 DCAF6Q58WW2 860 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 RABGAP1LQ5R372 815 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 NAIF1Q69YI7 327 aaPredicted RBP11.57□□□□□ -0.56
VARS2-213ENST00000625423 OPTNQ96CV9 577 aa11.57□□□□□ -0.56
VARS2-213ENST00000625423 OTOFQ9HC10 1997 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 A0A088AWK7 358 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 OPHN1O60890 802 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 STK10O94804 968 aaKnown RBP11.56□□□□□ -0.56
VARS2-213ENST00000625423 PROCP04070 461 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SERPINE1P05121 402 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 F7P08709 466 aaPredicted RBP11.56□□□□□ -0.56
VARS2-213ENST00000625423 TYK2P29597 1187 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 AP2B1P63010 937 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 FBXO47Q5MNV8 452 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 VWA5B1Q5TIE3 1220 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 ZNF410Q86VK4 478 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 CRYBG2Q8N1P7 616 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 GSTCDQ8NEC7 633 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 ATXN7L3BQ96GX2 97 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SORT1Q99523 831 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SHCBP1LQ9BZQ2 653 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SNX25Q9H3E2 840 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 PRDM12Q9H4Q4 367 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SETD4Q9NVD3 440 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 KLK14Q9P0G3 267 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 TXNDC16Q9P2K2 825 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SORCS3Q9UPU3 1222 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 ARHGAP42A6NI28 874 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 ZSWIM8A7E2V4 1837 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 ADCY6O43306 1168 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SIN3BO75182 1162 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 RECQL4O94761 1208 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 USP1O94782 785 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 TKTP29401 623 aaKnown RBP11.56□□□□□ -0.56
VARS2-213ENST00000625423 SCNN1AP37088 669 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 ACADSBP45954 432 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 RPL34P49207 117 aaKnown RBP11.56□□□□□ -0.56
VARS2-213ENST00000625423 GTF2A2P52657 109 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms