RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RTN2O75298 545 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 EPN2O95208 641 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 LATS1O95835 1130 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 PENKP01210 267 aaPredicted RBP13.15□□□□□ -0.3
PNKP-217ENST00000625216 HMBSP08397 361 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 CISD3P0C7P0 127 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 TMEM253P0C7T8 217 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 GZMAP12544 262 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 LCP1P13796 627 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 NTSR1P30989 418 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 ACADSBP45954 432 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 DGKGP49619 791 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 CENPCQ03188 943 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 KIF5AQ12840 1032 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 RSPO4Q2I0M5 234 aaPredicted RBP13.15□□□□□ -0.3
PNKP-217ENST00000625216 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 ACAD10Q6JQN1 1059 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 PMF1Q6P1K2 205 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 SFTPA1Q8IWL2 248 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 C1orf131Q8NDD1 294 aaKnown RBP13.15□□□□□ -0.3
PNKP-217ENST00000625216 STK32AQ8WU08 396 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 NDRG1Q92597 394 aaKnown RBP13.15□□□□□ -0.3
PNKP-217ENST00000625216 GOLGA1Q92805 767 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 SLC2A11Q9BYW1 496 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
PNKP-217ENST00000625216 INTUQ9ULD6 942 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 PAXBP1Q9Y5B6 917 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 ANTXRLA6NF34 631 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 BTNL10A8MVZ5 291 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 NPC1O15118 1278 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 TRIM24O15164 1050 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 ZBTB24O43167 697 aaPredicted RBP13.14□□□□□ -0.31
PNKP-217ENST00000625216 KRT86O43790 486 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 ADAM23O75077 832 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 FTLP02792 175 aaPredicted RBP13.14□□□□□ -0.31
PNKP-217ENST00000625216 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
PNKP-217ENST00000625216 ABCB4P21439 1286 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 CDH5P33151 784 aaPredicted RBP13.14□□□□□ -0.31
PNKP-217ENST00000625216 GPD2P43304 727 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 RPL34P49207 117 aaKnown RBP13.14□□□□□ -0.31
PNKP-217ENST00000625216 RGS7P49802 495 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 FYB2Q5VWT5 728 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 MSANTD2Q6P1R3 559 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 PRR23CQ6ZRP0 262 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 FAM217AQ8IXS0 508 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 MDGA1Q8NFP4 955 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 NETO1Q8TDF5 533 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 TRIM62Q9BVG3 475 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 DUSP15Q9H1R2 295 aaPredicted RBP13.14□□□□□ -0.31
PNKP-217ENST00000625216 ARRDC1-AS1Q9H2J1 176 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 PDCL3Q9H2J4 239 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 STOML2Q9UJZ1 356 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 CDV3Q9UKY7 258 aaKnown RBP13.14□□□□□ -0.31
PNKP-217ENST00000625216 CAPN6Q9Y6Q1 641 aa13.14□□□□□ -0.31
PNKP-217ENST00000625216 CEP250Q9BV73 2442 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 DMXL1Q9Y485 3027 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 MACROD2A1Z1Q3 448 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 ANKRD62A6NC57 917 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 PRRT4C9JH25 899 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
PNKP-217ENST00000625216 GABBR2O75899 941 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 MOCS3O95396 460 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
PNKP-217ENST00000625216 LTFP02788 710 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 TNNT1P13805 278 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 PTP4A2Q12974 167 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 MPPE1Q53F39 396 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 PLA2G2CQ5R387 149 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 MON1BQ7L1V2 547 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 BEND5Q7L4P6 421 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 DGLUCYQ7Z3D6 616 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 UNC45BQ8IWX7 931 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 CHPFQ8IZ52 775 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 TXLNBQ8N3L3 684 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 WDTC1Q8N5D0 677 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 UCMAQ8WVF2 138 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 EDEM1Q92611 657 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 AZIN2Q96A70 460 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 WDR24Q96S15 920 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 C11orf70Q9BRQ4 267 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 PLK2Q9NYY3 685 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 SFMBT1Q9UHJ3 866 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 CYTH4Q9UIA0 394 aa13.13□□□□□ -0.31
PNKP-217ENST00000625216 TCRBV21S2A2A0A5A6 115 aa13.12□□□□□ -0.31
PNKP-217ENST00000625216 DCLK1O15075 740 aa13.12□□□□□ -0.31
PNKP-217ENST00000625216 TIMM44O43615 452 aa13.12□□□□□ -0.31
PNKP-217ENST00000625216 BUB1O43683 1085 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms