RNA–Protein interactions for RNA: ENST00000624693.1

C11orf49-223, Transcript of chromosome 11 open reading frame 49, human

Gene C11orf49, Length 2,141 nt, Biotype TEC.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-223	ENST00000624693	LAMTOR4	Q0VGL1	99 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	PDAP1	Q13442	181 aa	Known RBP	13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	DGKD	Q16760	1214 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	ATP13A4	Q4VNC1	1196 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	RALGPS1	Q5JS13	557 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	SYCP2L	Q5T4T6	812 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	SLC39A4	Q6P5W5	647 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	CDHR3	Q6ZTQ4	885 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	LRRC71	Q8N4P6	559 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	ACTL9	Q8TC94	416 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	TRAPPC12	Q8WVT3	735 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	DLG3	Q92796	817 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	RTKN	Q9BST9	563 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	C16orf70	Q9BSU1	422 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	KLC2	Q9H0B6	622 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	VPS28	Q9UK41	221 aa		13.12	□□□□□ -0.31
C11orf49-223	ENST00000624693	MGAM	O43451	1857 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	MEI4	A8MW99	385 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	KBTBD13	C9JR72	458 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693		H3BRB1	525 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	MATN2	O00339	956 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	ITM2A	O43736	263 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	RFPL1	O75677	317 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	KRT7	P08729	469 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	KIT	P10721	976 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	HOXD8	P13378	290 aa	Predicted RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	INSRR	P14616	1297 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	ALOX15	P16050	662 aa	Predicted RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	EIF4B	P23588	611 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	PRKCH	P24723	683 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	CNTF	P26441	200 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	VARS	P26640	1264 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	MLH1	P40692	756 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	TUBA4A	P68366	448 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	MRPS5	P82675	430 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	OTUD4	Q01804	1114 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	NOG	Q13253	232 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	ADGRE1	Q14246	886 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	CCL14	Q16627	93 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	RWDD4	Q6NW29	188 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	EFCAB12	Q6NXP0	572 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	POTEH	Q6S545	545 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	TIFAB	Q6ZNK6	161 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	DEFB107A	Q8IZN7	70 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	PPP1R14C	Q8TAE6	165 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	DQX1	Q8TE96	717 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	LRRC39	Q96DD0	335 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	PRPF18	Q99633	342 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	OSBPL6	Q9BZF3	934 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	TUT1	Q9H6E5	874 aa	Known RBP	13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	6e-6	■■■■■ 48.1
C11orf49-223	ENST00000624693	CNTN6	Q9UQ52	1028 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	COL1A2	P08123	1366 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	EVPL	Q92817	2033 aa		13.11	□□□□□ -0.31
C11orf49-223	ENST00000624693	CHAD	O15335	359 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	DYNC1LI2	O43237	492 aa	Predicted RBP	13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ZNF189	O75820	626 aa	Predicted RBP	13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	TMEM63A	O94886	807 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	PIGR	P01833	764 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ITGAX	P20702	1163 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	MMP8	P22894	467 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	GRK2	P25098	689 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	PCSK6	P29122	969 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	FCGRT	P55899	365 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	IGBP1	P78318	339 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	GAD2	Q05329	585 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	DPYSL3	Q14195	570 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	TAZ	Q16635	292 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	METTL21C	Q5VZV1	264 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	GRAMD4	Q6IC98	578 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	SLFN12L	Q6IEE8	588 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	C15orf39	Q6ZRI6	1047 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ZBTB8OS	Q8IWT0	167 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ZSWIM2	Q8NEG5	633 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	SNRNP27	Q8WVK2	155 aa	Known RBP	13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	EBF4	Q9BQW3	602 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	MECR	Q9BV79	373 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	NUF2	Q9BZD4	464 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	C2orf40	Q9H1Z8	148 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	VPS45	Q9NRW7	570 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	RRN3	Q9NYV6	651 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	TMED5	Q9Y3A6	229 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693		H3BSA7	217 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ADCY6	O43306	1168 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	FBXO21	O94952	628 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	C22orf31	O95567	290 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	LSM8	O95777	96 aa	Known RBP	13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	CCDC130	P13994	396 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ATP6V1B1	P15313	513 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ZNF12	P17014	697 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ALDH3B2	P48448	385 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	OXCT1	P55809	520 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	LLGL2	Q6P1M3	1020 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	HPS6	Q86YV9	775 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	GPD1L	Q8N335	351 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	RNF149	Q8NC42	400 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	ACMSD	Q8TDX5	336 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	PPP4R1	Q8TF05	950 aa		13.1	□□□□□ -0.31
C11orf49-223	ENST00000624693	SLC2A11	Q9BYW1	496 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms