RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 QKIQ96PU8 341 aaKnown RBP eCLIP10.67□□□□□ -0.7
ATRX-216ENST00000624403 TTLL2Q9BWV7 592 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 OSBPL2Q9H1P3 480 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 PRDM10Q9NQV6 1147 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 AAASQ9NRG9 546 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 CLIC5Q9NZA1 410 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 DTLQ9NZJ0 730 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 CXXC1Q9P0U4 656 aaPredicted RBP10.67□□□□□ -0.7
ATRX-216ENST00000624403 TPX2Q9ULW0 747 aaKnown RBP10.67□□□□□ -0.7
ATRX-216ENST00000624403 PLAAQ9Y263 795 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 PLXNA3P51805 1871 aa10.67□□□□□ -0.7
ATRX-216ENST00000624403 KCNN4O15554 427 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 GJB5O95377 273 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 SYF2O95926 243 aaKnown RBP10.66□□□□□ -0.7
ATRX-216ENST00000624403 LINC00271P0C7V0 271 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 JUNDP17535 347 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 ERCC2P18074 760 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 RBL1P28749 1068 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 STIP1P31948 543 aaKnown RBP10.66□□□□□ -0.7
ATRX-216ENST00000624403 CCR1P32246 355 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 PPM1AP35813 382 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 ZNF135P52742 658 aaPredicted RBP10.66□□□□□ -0.7
ATRX-216ENST00000624403 NRLP54845 237 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 RAB33AQ14088 237 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 PPP2R5DQ14738 602 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 SLMAPQ14BN4 828 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 SLC45A4Q5BKX6 768 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 SPDYCQ5MJ68 293 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 RNASEH2BQ5TBB1 312 aaKnown RBP10.66□□□□□ -0.7
ATRX-216ENST00000624403 TPGS2Q68CL5 300 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 LRIG3Q6UXM1 1119 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 CCDC25Q86WR0 208 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 VPS52Q8N1B4 723 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 FIBCD1Q8N539 461 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 TAB3Q8N5C8 712 aaPredicted RBP10.66□□□□□ -0.7
ATRX-216ENST00000624403 ZNF461Q8TAF7 563 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 RTP4Q96DX8 246 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 FCRL2Q96LA5 508 aaPredicted RBP10.66□□□□□ -0.7
ATRX-216ENST00000624403 CEP295NLQ96MC4 621 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 PWWP2AQ96N64 755 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 SERPINB11Q96P15 392 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 OLFM3Q96PB7 478 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 HAPLN3Q96S86 360 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 EPB41L4BQ9H329 900 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 TLR8Q9NR97 1041 aaKnown RBP10.66□□□□□ -0.7
ATRX-216ENST00000624403 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.66□□□□□ -0.7
ATRX-216ENST00000624403 OR12D3Q9UGF7 316 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 PCDHB12Q9Y5F1 795 aa10.66□□□□□ -0.7
ATRX-216ENST00000624403 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 KCNU1A8MYU2 1149 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 HACD1B0YJ81 288 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 H0YGN5 161 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 PAGE1O75459 146 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 FGF18O76093 207 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 LRIG2O94898 1065 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 TBX18O95935 607 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 ZDHHC11BP0C7U3 371 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 TBX4P57082 545 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 CBX1P83916 185 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 EFEMP1Q12805 493 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 MORF4L2Q15014 288 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 C10orf120Q5SQS8 335 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 UBAP2Q5T6F2 1119 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 PSRC1Q6PGN9 363 aaPredicted RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 BZW1Q7L1Q6 419 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 HERC6Q8IVU3 1022 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 PPIL6Q8IXY8 311 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 ZCCHC9Q8N567 271 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 NETO2Q8NC67 525 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 HERVK_113Q902F9 699 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 CPT1BQ92523 772 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 SLC39A13Q96H72 371 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 RUFY1Q96T51 708 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 SH3GL2Q99962 352 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 FOXP3Q9BZS1 431 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 UBE2OQ9C0C9 1292 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 PABPC3Q9H361 631 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 SEMA4AQ9H3S1 761 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 CYP4F11Q9HBI6 524 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 MED4Q9NPJ6 270 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 MRPL17Q9NRX2 175 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 OLA1Q9NTK5 396 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 DNAJC17Q9NVM6 304 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 TMEM51Q9NW97 253 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 HSFX1Q9UBD0 423 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 XPO7Q9UIA9 1087 aaKnown RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 MAGED2Q9UNF1 606 aaPredicted RBP10.65□□□□□ -0.7
ATRX-216ENST00000624403 SHOC2Q9UQ13 582 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 TLR6Q9Y2C9 796 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 INSL6Q9Y581 213 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 NFS1Q9Y697 457 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 MYO16Q9Y6X6 1858 aa10.65□□□□□ -0.7
ATRX-216ENST00000624403 PTPRSQ13332 1948 aa10.64□□□□□ -0.71
ATRX-216ENST00000624403 KIAA0100Q14667 2235 aaKnown RBP10.64□□□□□ -0.71
ATRX-216ENST00000624403 NDC80O14777 642 aa10.64□□□□□ -0.71
ATRX-216ENST00000624403 OPA1O60313 960 aa10.64□□□□□ -0.71
ATRX-216ENST00000624403 LILRB3O75022 631 aa10.64□□□□□ -0.71
ATRX-216ENST00000624403 MOCS2O96007 188 aaPredicted RBP10.64□□□□□ -0.71
ATRX-216ENST00000624403 VAV1P15498 845 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms