RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ZNF165P49910 485 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 GSCP56915 257 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 SLC12A1Q13621 1099 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ZNF234Q14588 700 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 TAF5Q15542 800 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 BRMS1LQ5PSV4 323 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 PPP1R2P3Q6NXS1 205 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 RFWD3Q6PCD5 774 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 SLC36A4Q6YBV0 504 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ADIPOR2Q86V24 386 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 XYLT1Q86Y38 959 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 DHX40Q8IX18 779 aaKnown RBP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 AOPEPQ8N6M6 819 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ADAM32Q8TC27 787 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 HMGB4Q8WW32 186 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 TTC17Q96AE7 1141 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 LMLNQ96KR4 655 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 PPP1R9BQ96SB3 815 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 NPY6RQ99463 290 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 PRMT1Q99873 361 aaKnown RBP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 SEMA4GQ9NTN9 838 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 DDIT4Q9NX09 232 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 DLL3Q9NYJ7 618 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 PLA2G4CQ9UP65 541 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 STON1Q9Y6Q2 735 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 CEP295Q9C0D2 2601 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ACACBO00763 2458 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 A0A1W2PQC6 194 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 F5H5T6 163 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 EPHB6O15197 1021 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
LINC00963-217ENST00000624009 MMP8P22894 467 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 CXCR3P49682 368 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-217ENST00000624009 FOXK2Q01167 660 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 FMO1Q01740 532 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 ARID5AQ03989 594 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 PUM1Q14671 1186 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00963-217ENST00000624009 LPAL2Q16609 132 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 SLC25A52Q3SY17 297 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 C5orf22Q49AR2 442 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 TMEM215Q68D42 235 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 MFN1Q8IWA4 741 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 PRICKLE1Q96MT3 831 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-217ENST00000624009 ACOX2Q99424 681 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 TPSD1Q9BZJ3 242 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
LINC00963-217ENST00000624009 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 PARD6AQ9NPB6 346 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
LINC00963-217ENST00000624009 ABCB8Q9NUT2 735 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 CACNA2D2Q9NY47 1150 aa12.88□□□□□ -0.35
LINC00963-217ENST00000624009 NYNRINQ9P2P1 1898 aaKnown RBP12.88□□□□□ -0.35
LINC00963-217ENST00000624009 GOLGA6L7A0A1B0GV03 622 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 A0A1B0GVM2 712 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 BCLAF3A2AJT9 711 aaKnown RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 TCAF2A6NFQ2 919 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 AP5Z1O43299 807 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 SYNCRIPO60506 623 aaKnown RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 TSPAN3O60637 253 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 GFPT2O94808 682 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 MOCS3O95396 460 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 IGLV3-19P01714 112 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 MMEP08473 750 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 UNGP13051 313 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 ATP1A3P13637 1013 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 POLR2EP19388 210 aaKnown RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 NDUFV2P19404 249 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 TACR2P21452 398 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 MPLP40238 635 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 IL12RB1P42701 662 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 ID4P47928 161 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 KLK7P49862 253 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 SGSHP51688 502 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 LIMK1P53667 647 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 CENPCQ03188 943 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 ZBTB16Q05516 673 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 SPEM2Q0P670 501 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 CAMK2GQ13555 558 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 CDH18Q13634 790 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 IQCB1Q15051 598 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 FAM102AQ5T9C2 384 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 MBLAC2Q68D91 279 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 KIAA1211LQ6NV74 962 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 PRR23CQ6ZRP0 262 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 SND1Q7KZF4 910 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 CHST9Q7L1S5 443 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 LPCAT2Q7L5N7 544 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms