RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CDH8P55286 799 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 SPCS2Q15005 226 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 RASA2Q15283 850 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 TAF5Q15542 800 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 BBS9Q3SYG4 887 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 EEPD1Q7L9B9 569 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 ARPINQ7Z6K5 226 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 LRRC71Q8N4P6 559 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 NAT8LQ8N9F0 302 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 FAM71DQ8N9W8 422 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 FBXO36Q8NEA4 188 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 C10orf82Q8WW14 230 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 C8orf48Q96LL4 319 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 XYLT2Q9H1B5 865 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 ALG13Q9NP73 1137 aaKnown RBP12.8□□□□□ -0.36
LITAF-221ENST00000622633 CNGB3Q9NQW8 809 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 TBC1D23Q9NUY8 699 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 COMMD8Q9NX08 183 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 RLFQ13129 1914 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 GOLGA8CPA6NN73 597 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 C19orf81C9J6K1 198 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 PRKCBP05771 671 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 HOXC6P09630 235 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 CES1P23141 567 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 BTKQ06187 659 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 LAMTOR4Q0VGL1 99 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 FBXL19Q6PCT2 694 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 POLNQ7Z5Q5 900 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 PCGF5Q86SE9 256 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.8□□□□□ -0.36
LITAF-221ENST00000622633 PALM2Q8IXS6 379 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 NATD1Q8N6N6 113 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 RNF169Q8NCN4 708 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 BIRC8Q96P09 236 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 PAFAH2Q99487 392 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 LIN28AQ9H9Z2 209 aaKnown RBP12.8□□□□□ -0.36
LITAF-221ENST00000622633 NPHS2Q9NP85 383 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 CPSF3Q9UKF6 684 aaKnown RBP12.8□□□□□ -0.36
LITAF-221ENST00000622633 ERVK-11Q9UQG0 969 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 PCDHGA8Q9Y5G5 932 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 LINC00854A0A1B0GVQ3 168 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 TMEM63AO94886 807 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 KRT19P08727 400 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 KRT7P08729 469 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 FOSL1P15407 271 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 EFNA5P52803 228 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 YWHAEP62258 255 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 GRM1Q13255 1194 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 ANKRD20A4Q4UJ75 823 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 BBS12Q6ZW61 710 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 RFX6Q8HWS3 928 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 LSMEM1Q8N8F7 131 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 LILRB4Q8NHJ6 448 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 LILRB1Q8NHL6 650 aaPredicted RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 OSCP1Q8WVF1 389 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 HSPH1Q92598 858 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 CPXM1Q96SM3 734 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 CYTH2Q99418 400 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 TTC1Q99614 292 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 XAB2Q9HCS7 855 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 NCKIPSDQ9NZQ3 722 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 HACD3Q9P035 362 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 SLC17A7Q9P2U7 560 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 ZFP69BQ9UJL9 534 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 PPME1Q9Y570 386 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 PCDHGA11Q9Y5H2 935 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 A6NL46 340 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 BAIAP3O94812 1187 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 GJB1P08034 283 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 TGFB3P10600 412 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 POLR2BP30876 1174 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 ETFBP38117 255 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 OVGP1Q12889 678 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 COL19A1Q14993 1142 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 ADGRD1Q6QNK2 874 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 TCP10LQ8TDR4 215 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 MRPL1Q9BYD6 325 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 UNKQ9C0B0 810 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 PPCSQ9HAB8 311 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 CYLDQ9NQC7 956 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 CCDC177Q9NQR7 707 aaPredicted RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 DNAJB4Q9UDY4 337 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 XPO7Q9UIA9 1087 aaKnown RBP12.79□□□□□ -0.36
LITAF-221ENST00000622633 DCTN4Q9UJW0 460 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 STRIP2Q9ULQ0 834 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 PPM1HQ9ULR3 514 aa12.79□□□□□ -0.36
LITAF-221ENST00000622633 PARP14Q460N5 1801 aa12.78□□□□□ -0.36
LITAF-221ENST00000622633 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
LITAF-221ENST00000622633 F8W8V4 182 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms