RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	KRTAP10-9	P60411	292 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	SMTNL2	Q2TAL5	461 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	MANEA	Q5SRI9	462 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	ASPHD1	Q5U4P2	390 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	ARL6IP4	Q66PJ3	421 aa	Known RBP	5	□□□□□ -1.61
BRCA1-229	ENST00000621897	TTLL5	Q6EMB2	1281 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	C9orf47	Q6ZRZ4	202 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	ABHD14A	Q9BUJ0	271 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	PRDM16	Q9HAZ2	1276 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	UTS2R	Q9UKP6	389 aa		5	□□□□□ -1.61
BRCA1-229	ENST00000621897	KIR2DS5	A0A0G2JLQ3	304 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897		A6NNC1	897 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	KIR2DS3	K7RE56	304 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	RPP40	O75818	363 aa	Known RBP	4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	CNTN5	O94779	1100 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	KRT18	P05783	430 aa	Known RBP	4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	MYL1	P05976	194 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	IL6ST	P40189	918 aa	Predicted RBP	4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	TBX4	P57082	545 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	NANOS2	P60321	138 aa	Known RBP	4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	SHC2	P98077	582 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	INPP5J	Q15735	1006 aa	Predicted RBP	4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	AAK1	Q2M2I8	961 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	GLE1	Q53GS7	698 aa	Known RBP	4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	HSP90AB2P	Q58FF8	381 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	NUGGC	Q68CJ6	796 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	RFX8	Q6ZV50	586 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	SRL	Q86TD4	932 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	TTC30A	Q86WT1	665 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	EXD3	Q8N9H8	876 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	OR52N4	Q8NGI2	321 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	PMM1	Q92871	262 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	FAR2	Q96K12	515 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	NLRP4	Q96MN2	994 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	MYD88	Q99836	296 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	ERVK-5	Q9HDB9	667 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	SLC52A1	Q9NWF4	448 aa		4.99	□□□□□ -1.61
BRCA1-229	ENST00000621897	NKX2-8	O15522	239 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	PRC1	O43663	620 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	SGPL1	O95470	568 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	NPPB	P16860	134 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	THBS3	P49746	956 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	PICALM	Q13492	652 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	PRTG	Q2VWP7	1150 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	KIAA1755	Q5JYT7	1200 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	ANKRD40	Q6AI12	368 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	WDR93	Q6P2C0	686 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	ZNF549	Q6P9A3	640 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	SLC39A5	Q6ZMH5	540 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	ADGRF3	Q8IZF5	1079 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	DEPTOR	Q8TB45	409 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	MUL1	Q969V5	352 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	CCDC136	Q96JN2	1154 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	KRTAP1-5	Q9BYS1	174 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	IPO11	Q9UI26	975 aa	Known RBP	4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	CDC23	Q9UJX2	597 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	RAB21	Q9UL25	225 aa		4.98	□□□□□ -1.61
BRCA1-229	ENST00000621897	AQP12B	A6NM10	295 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	CHRNB1	P11230	501 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	AKT1	P31749	480 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	ALDH7A1	P49419	539 aa	Known RBP	4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	FAM3B	P58499	235 aa	Predicted RBP	4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	TAS2R50	P59544	299 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	DLGAP5	Q15398	846 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	PIK3CD-AS1	Q5SR53	167 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	TRABD2A	Q86V40	505 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	DDIAS	Q8IXT1	998 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	KAT2A	Q92830	837 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	PRPF18	Q99633	342 aa	Known RBP	4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	MECR	Q9BV79	373 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	DECR2	Q9NUI1	292 aa		4.97	□□□□□ -1.61
BRCA1-229	ENST00000621897	KIF28P	B7ZC32	967 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	PRPF4	O43172	522 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	DNPH1	O43598	174 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	ASNA1	O43681	348 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	IGFBP2	P18065	325 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	TGM2	P21980	687 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	TKT	P29401	623 aa	Known RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	ALDH18A1	P54886	795 aa	Known RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	FOXL2	P58012	376 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	RPL15	P61313	204 aa	Known RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	DGKK	Q5KSL6	1271 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	C6orf10	Q5SRN2	563 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	CCDC181	Q5TID7	509 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	DAB2IP	Q5VWQ8	1189 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	RUSC1-AS1	Q66K80	236 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	RINT1	Q6NUQ1	792 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	XRRA1	Q6P2D8	792 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	B4GALNT4	Q76KP1	1039 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	TMEM199	Q8N511	208 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM47B	Q8NA70	645 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	SRFBP1	Q8NEF9	429 aa	Known RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	ASB5	Q8WWX0	329 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	TNIP3	Q96KP6	325 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	MARK4	Q96L34	752 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	MLXIP	Q9HAP2	919 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	IL21R	Q9HBE5	538 aa		4.96	□□□□□ -1.62

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