RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 GRID1Q9ULK0 1009 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 STARD13Q9Y3M8 1113 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 CDY2AQ9Y6F7 541 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 DOPEY2Q9Y3R5 2298 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 LOXHD1Q8IVV2 1947 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 F5H5T6 163 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 MZF1P28698 734 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 HIRAP54198 1017 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 SP2Q02086 613 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 POU6F1Q14863 301 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ANKRD20A2Q5SQ80 823 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 MAP3K21Q5TCX8 1036 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ANKRD20A1Q5TYW2 823 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 MARK2Q7KZI7 788 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 OTOAQ7RTW8 1153 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TAGAPQ8N103 731 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TCP10LQ8TDR4 215 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF75CPQ92670 426 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CAPNS2Q96L46 248 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 GBP5Q96PP8 586 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CINPQ9BW66 212 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 DRC3Q9H069 523 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 EBF2Q9HAK2 575 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 XAB2Q9HCS7 855 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CNOT1A5YKK6 2376 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 A0A0B4J269 797 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TMEM247A6NEH6 219 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PDZK1P1A8MUH7 402 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 BTBD19C9JJ37 291 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TPST1O60507 370 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 EDF1O60869 148 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 GCAP28676 217 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PBX3P40426 434 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 MCL1Q07820 350 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF252P-AS1Q0IIN9 211 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 GTF2H3Q13889 308 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 KYAT1Q16773 422 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 RNASEH2BQ5TBB1 312 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 EEF1DP3Q658K8 133 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 RGL4Q8IZJ4 473 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 EXOC2Q96KP1 924 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ZFP42Q96MM3 310 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PCDH9Q9HC56 1237 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 SPASTQ9UBP0 616 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 VANGL2Q9ULK5 521 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 NR2E3Q9Y5X4 410 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 RBBP6Q7Z6E9 1792 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TBC1D3BA6NDS4 549 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ATP5HO75947 161 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 STBD1O95210 358 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PIRTP0C851 137 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TGFB3P10600 412 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ZFXP17010 805 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 MAPK9P45984 424 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 RTP1P59025 263 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 HIC1Q14526 733 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 FNBP1LQ5T0N5 605 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TRIM48Q8IWZ4 208 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PHACTR4Q8IZ21 702 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PPHLN1Q8NEY8 458 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TEKT4Q8WW24 435 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TFAP2BQ92481 460 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 DDX50Q9BQ39 737 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TRIM62Q9BVG3 475 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 FBXO10Q9UK96 956 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 AURKCQ9UQB9 309 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNFX1Q9P2E3 1918 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 KPNA7A9QM74 516 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 SUPT3HB4E1H0 165 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ALOX15BO15296 676 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 SUPT3HO75486 399 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 EDN1P05305 212 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CD48P09326 243 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ENO3P13929 434 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 SYN1P17600 705 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CDKN2BP42772 138 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 RHOAP61586 193 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 FSTL1Q12841 308 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CRYMQ14894 314 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 POLD3Q15054 466 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 DENND1BQ6P3S1 775 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 DOK6Q6PKX4 331 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CATSPERGQ6ZRH7 1159 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ILDR2Q71H61 639 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PTAR1Q7Z6K3 402 aaPredicted RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 PPIL6Q8IXY8 311 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 ANKLE1Q8NAG6 615 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 JOSD2Q8TAC2 188 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 DTX3LQ8TDB6 740 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TMA16Q96EY4 203 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 CORO1BQ9BR76 489 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 TBC1D10AQ9BXI6 508 aa8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 RBM22Q9NW64 420 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTPDC1-204ENST00000620992 RIF1Q5UIP0 2472 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 GLTPD2A6NH11 291 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 RHOBTB1O94844 696 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 PDHA1P08559 390 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms