RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 FKBP9P1Q75LS8 142 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ALYREFQ86V81 257 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 PLD3Q8IV08 490 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 REPS2Q8NFH8 660 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 MIEF2Q96C03 454 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 RNF112Q9ULX5 631 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 TTLL13PA6NNM8 815 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 NFICP08651 508 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 TSHRP16473 764 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 UBA1P22314 1058 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF143P52747 638 aaPredicted RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 CCDC15Q0P6D6 951 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 NAB1Q13506 487 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 OASLQ15646 514 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 FBXO47Q5MNV8 452 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 TIGD7Q6NT04 549 aaPredicted RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 IYDQ6PHW0 289 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 C10orf53Q8N6V4 93 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 HELQQ8TDG4 1101 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 KAT2BQ92831 832 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 PLEKHA8Q96JA3 519 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 CRLS1Q9UJA2 301 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ACOT9Q9Y305 439 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 SETD1AO15047 1707 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 C16orf96A6NNT2 1141 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 NR5A2O00482 541 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ALOX15BO15296 676 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 CHRNB2P17787 502 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 CHRM3P20309 590 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 AKAP5P24588 427 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 XRCC4Q13426 336 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 CAPSQ13938 189 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 UBAP2LQ14157 1087 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 CRY2Q49AN0 593 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 AASDHQ4L235 1098 aaPredicted RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 C6orf10Q5SRN2 563 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 PLEKHM3Q6ZWE6 761 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 DIS3LQ8TF46 1054 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 PYDC1Q8WXC3 89 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 CELF6Q96J87 481 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF184Q99676 751 aaPredicted RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ACO2Q99798 780 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ZC4H2Q9NQZ6 224 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 RIC8BQ9NVN3 520 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 SLC17A7Q9P2U7 560 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 NR2E1Q9Y466 385 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 DNM1LO00429 736 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 TPST1O60507 370 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 EDF1O60869 148 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ERVK-10P10266 1014 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 TGFB3P10600 412 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 PEX5P50542 639 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ALDH6A1Q02252 535 aaKnown RBP8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ZACNQ401N2 412 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 MON1BQ7L1V2 547 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF398Q8TD17 642 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 BLOC1S5Q8TDH9 187 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 USP6NLQ92738 828 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ASB7Q9H672 318 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 TBC1D23Q9NUY8 699 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 ANKRD6Q9Y2G4 727 aa8.54□□□□□ -1.04
ALMS1-208ENST00000620466 SNED1Q8TER0 1413 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 IGLV3-22A0A075B6J6 115 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 A0A096LPK6 155 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 MAGEB16A2A368 324 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 NCF1BA6NI72 391 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 NCF1CA8MVU1 366 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 GPR182O15218 404 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 AVILO75366 819 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 WDR47O94967 919 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 CLPTM1O96005 669 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 NCF1P14598 390 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 SERPINB10P48595 397 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 CRADDP78560 199 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF177Q13360 481 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 GRIK4Q16099 956 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 DEPDC1Q5TB30 811 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 GPR141Q7Z602 305 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 DEFB106AQ8N104 65 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 BSNDQ8WZ55 320 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 NFKBIZQ9BYH8 718 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ASCC2Q9H1I8 757 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 NDUFA13Q9P0J0 144 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF229Q9UJW7 825 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 APPL1Q9UKG1 709 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 SCN11AQ9UI33 1791 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 TUBGCP3Q96CW5 907 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 MROH8Q9H579 483 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 WWOXQ9NZC7 414 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 F9P00740 461 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 PROCP04070 461 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ACAT1P24752 427 aaKnown RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 FNBP1LQ5T0N5 605 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 OSMRQ99650 979 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 GRHL1Q9NZI5 618 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 LAMB4A4D0S4 1761 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms