RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 STK39Q9UEW8 545 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 CCPG1Q9ULG6 757 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 TBC1D30Q9Y2I9 924 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 TMED5Q9Y3A6 229 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 AP4S1Q9Y587 144 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 ST14Q9Y5Y6 855 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 CYP3A7-CYP3A51PA0A087WV96 503 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 RNASEH2AO75792 299 aaKnown RBP10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 KRT3P12035 628 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 ZNF23P17027 643 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 CYP3A7P24462 503 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 CDKN2BP42772 138 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 NOMO3P69849 1222 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 RALGDSQ12967 914 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 PGS1Q32NB8 556 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 SLC9B1Q4ZJI4 515 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 DCDC5Q6ZRR9 648 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 MON1BQ7L1V2 547 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 SNX29P2Q8IUI4 249 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 EXOC8Q8IYI6 725 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 OFCC1Q8IZS5 231 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 OR52B2Q96RD2 323 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 WDR11Q9BZH6 1224 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 CLK4Q9HAZ1 481 aaKnown RBP10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 PCDH12Q9NPG4 1184 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 DGKBQ9Y6T7 804 aa10.03□□□□□ -0.8
TNFAIP3-210ENST00000620204 TPP1O14773 563 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 ZBTB14O43829 449 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 TIPRLO75663 272 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 SERPINE1P05121 402 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 RHBDL3P58872 404 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 ZNF423Q2M1K9 1284 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 GPAT2Q6NUI2 795 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 KCNT2Q6UVM3 1135 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 ZNF606Q8WXB4 792 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 KLC2Q9H0B6 622 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 C17orf75Q9HAS0 396 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 GPATCH2LQ9NWQ4 482 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 DDX56Q9NY93 547 aaKnown RBP10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 CNTN3Q9P232 1028 aa10.02□□□□□ -0.8
TNFAIP3-210ENST00000620204 KANSL1LA0AUZ9 987 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 A6NL46 340 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 TOR1BO14657 336 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 ESRRBO95718 433 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 IREB2P48200 963 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 PRPSAP1Q14558 356 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF362Q5T0B9 420 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 TEDDM1Q5T9Z0 273 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC9A9Q8IVB4 645 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZNF781Q8N8C0 355 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 SCAIQ8N9R8 606 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 TMEM35BQ8NCS4 154 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 HNRNPABQ99729 332 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 EFHD1Q9BUP0 239 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 HERC2P3Q9BVR0 1158 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 NOL6Q9H6R4 1146 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 ATAD3AQ9NVI7 634 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 SEPT10Q9P0V9 454 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 SIRPGQ9P1W8 387 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 SORCS3Q9UPU3 1222 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZHX2Q9Y6X8 837 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 SCN7AQ01118 1682 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 TAF1LQ8IZX4 1826 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 AP3B1O00203 1094 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 RFPL1O75677 317 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 ATE1O95260 518 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 BCL10O95999 233 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 MAGP20916 626 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 PIK3R1P27986 724 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 GPC3P51654 580 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 OGDHQ02218 1023 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 PLCL1Q15111 1095 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 TCEAL1Q15170 157 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 CMC1Q7Z7K0 106 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 IFNEQ86WN2 208 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 NETO2Q8NC67 525 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 BPIFB6Q8NFQ5 453 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 CDKL2Q92772 493 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 NKD2Q969F2 451 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 NAA50Q9GZZ1 169 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 NGRNQ9NPE2 291 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 GPRC5DQ9NZD1 345 aa10.02□□□□□ -0.81
TNFAIP3-210ENST00000620204 A0A087WXM4 84 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 PLOD2O00469 737 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 KLF11O14901 512 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 KRT19P08727 400 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 TMEM191BP0C7N4 346 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 CPA3P15088 417 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 JAK1P23458 1154 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 GLRBP48167 497 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 STRIP1Q5VSL9 837 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 ANGEL2Q5VTE6 544 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 PGM2L1Q6PCE3 622 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 PARP8Q8N3A8 854 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 IRGQQ8WZA9 623 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 CCDC138Q96M89 665 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 ADNPQ9H2P0 1102 aa10.01□□□□□ -0.81
TNFAIP3-210ENST00000620204 SNX25Q9H3E2 840 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms