RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 CSPG4P5Q96PW8 444 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 TTC1Q99614 292 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 HEY1Q9Y5J3 304 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 GJB1P08034 283 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 PGAM1P18669 254 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 ABCE1P61221 599 aaKnown RBP13.45□□□□□ -0.26
SKP2-209ENST00000620197 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
SKP2-209ENST00000620197 ASPHQ12797 758 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 METTL21CQ5VZV1 264 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 LPCAT4Q643R3 524 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 C16orf46Q6P387 395 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 PRICKLE1Q96MT3 831 aaPredicted RBP13.45□□□□□ -0.26
SKP2-209ENST00000620197 KCTD15Q96SI1 283 aaPredicted RBP13.45□□□□□ -0.26
SKP2-209ENST00000620197 RTKNQ9BST9 563 aa13.45□□□□□ -0.26
SKP2-209ENST00000620197 A0A0A0MRY4 1105 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 C22orf31O95567 290 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 ZFXP17010 805 aaPredicted RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 HSDL1Q3SXM5 330 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 ANKRD20A4Q4UJ75 823 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 HACE1Q8IYU2 909 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 CPSF7Q8N684 471 aaKnown RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 NAT14Q8WUY8 206 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 HPDLQ96IR7 371 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 SPATA13Q96N96 652 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 GBP5Q96PP8 586 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 TMEM216Q9P0N5 145 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 MAD1L1Q9Y6D9 718 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 PENKP01210 267 aaPredicted RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 CD1EP15812 388 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 FDFT1P37268 417 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 GLUD2P49448 558 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 LY6KQ17RY6 165 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 CELF3Q5SZQ8 465 aaKnown RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 PPP1R26Q5T8A7 1209 aaPredicted RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 OTUD1Q5VV17 481 aaPredicted RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 PDPK2PQ6A1A2 396 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 KCNT2Q6UVM3 1135 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 NAPRTQ6XQN6 538 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 CMTM5Q96DZ9 223 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 HEXIM2Q96MH2 286 aaKnown RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 MAGEB5Q9BZ81 275 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 RCOR3Q9P2K3 495 aaPredicted RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 APOBEC2Q9Y235 224 aaKnown RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 UNCXA6NJT0 531 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 MAP3K21Q5TCX8 1036 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 DCAF15Q66K64 600 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 TMC7Q7Z402 723 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 ARHGAP22Q7Z5H3 698 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.44□□□□□ -0.26
SKP2-209ENST00000620197 KLRG1Q96E93 195 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 CENPKQ9BS16 269 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 ADAM28Q9UKQ2 775 aa13.44□□□□□ -0.26
SKP2-209ENST00000620197 SMIM31A0A1B0GVY4 71 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 SLC22A2O15244 555 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 CAPN15O75808 1086 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 ERFP50548 548 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 CCDC153Q494R4 210 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 SLC26A9Q7LBE3 791 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 POU5F2Q8N7G0 328 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 C12orf29Q8N999 325 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 RILPQ96NA2 401 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 MFHAS1Q9Y4C4 1052 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 TMEM114B3SHH9 223 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 IRF6O14896 467 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 VILLO15195 856 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 GRAP2O75791 330 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 DPEP1P16444 411 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 SLC26A2P50443 739 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 OSTNP61366 133 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 TLR1Q15399 786 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 GOLGA7BQ2TAP0 167 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 ARHGAP17Q68EM7 881 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 OR6B2Q6IFH4 312 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 LIMS2Q7Z4I7 341 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 SDCCAG8Q86SQ7 713 aaPredicted RBP13.43□□□□□ -0.26
SKP2-209ENST00000620197 TRIM50Q86XT4 487 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 NT5DC4Q86YG4 428 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 B4GALNT2Q8NHY0 566 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 HTR3CQ8WXA8 447 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 OXCT2Q9BYC2 517 aaPredicted RBP13.43□□□□□ -0.26
SKP2-209ENST00000620197 CDH19Q9H159 772 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 VCX3BQ9H321 246 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 PRMT7Q9NVM4 692 aaPredicted RBP13.43□□□□□ -0.26
SKP2-209ENST00000620197 PLK2Q9NYY3 685 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 C6orf203Q9P0P8 240 aaPredicted RBP13.43□□□□□ -0.26
SKP2-209ENST00000620197 RIMS3Q9UJD0 308 aa13.43□□□□□ -0.26
SKP2-209ENST00000620197 KRT19P08727 400 aa13.42□□□□□ -0.26
SKP2-209ENST00000620197 COX4I1P13073 169 aa13.42□□□□□ -0.26
SKP2-209ENST00000620197 HSPA1LP34931 641 aa13.42□□□□□ -0.26
SKP2-209ENST00000620197 NSUN2Q08J23 767 aaKnown RBP eCLIP13.42□□□□□ -0.26
SKP2-209ENST00000620197 CDO1Q16878 200 aa13.42□□□□□ -0.26
SKP2-209ENST00000620197 VWA5B1Q5TIE3 1220 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms