RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■■□□□ 13
PSMC3-213ENST00000619920 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.79■□□□□ 0.12
PSMC3-213ENST00000619920 AFF4Q9UHB7 1163 aaKnown RBP15.79■□□□□ 0.12
PSMC3-213ENST00000619920 WDR27A2RRH5 827 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 SLC38A8A6NNN8 435 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 E7EVH7 732 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 FGF10O15520 208 aaPredicted RBP15.78■□□□□ 0.12
PSMC3-213ENST00000619920 MTSS1O43312 755 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 MSI1O43347 362 aaKnown RBP15.78■□□□□ 0.12
PSMC3-213ENST00000619920 ZDHHC11BP0C7U3 371 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 OR1D2P34982 312 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 C1QTNF8P60827 252 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 MAGOHP61326 146 aaKnown RBP15.78■□□□□ 0.12
PSMC3-213ENST00000619920 DEFB103AP81534 67 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 DSG1Q02413 1049 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 PPIDQ08752 370 aaKnown RBP15.78■□□□□ 0.12
PSMC3-213ENST00000619920 GALNT2Q10471 571 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 AP1B1Q10567 949 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 BTG3Q14201 252 aaPredicted RBP15.78■□□□□ 0.12
PSMC3-213ENST00000619920 ANKRD20A2Q5SQ80 823 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 ANKRD20A1Q5TYW2 823 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 MANEALQ5VSG8 457 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 ANKRD20A3Q5VUR7 823 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 TPGS2Q68CL5 300 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 ZNF276Q8N554 614 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 CCNYQ8ND76 341 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 PYROXD1Q8WU10 500 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 P2RY11Q96G91 374 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 TMEM169Q96HH4 297 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 SNX10Q9Y5X0 201 aa15.78■□□□□ 0.12
PSMC3-213ENST00000619920 MYO16Q9Y6X6 1858 aa15.77■□□□□ 0.12
PSMC3-213ENST00000619920 RNF103O00237 685 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 ADAM12O43184 909 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 SHOX2O60902 331 aaPredicted RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 SOAT2O75908 522 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 ABLIM3O94929 683 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 METTL18O95568 372 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 ATP5DP30049 168 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 PHBP35232 272 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 LMAN1P49257 510 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 MLLT6P55198 1093 aaPredicted RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 TBX4P57082 545 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 CDK16Q00536 496 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 GAD2Q05329 585 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 ZNF33AQ06730 810 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 MTA1Q13330 715 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 SEMA5AQ13591 1074 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 FASTKD3Q14CZ7 662 aaKnown RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 TRIP4Q15650 581 aaPredicted RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 LONRF1Q17RB8 773 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 MSS51Q4VC12 460 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 CCDC38Q502W7 563 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 ACBD5Q5T8D3 534 aaPredicted RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 CCDC13Q8IYE1 715 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 RIBC1Q8N443 379 aaPredicted RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 CCDC33Q8N5R6 958 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 LZTR1Q8N653 840 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 ATP11CQ8NB49 1132 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 STKLD1Q8NE28 680 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 GPR152Q8TDT2 470 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 LRRN4Q8WUT4 740 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 HDAC11Q96DB2 347 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 TBC1D31Q96DN5 1066 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 FCRL2Q96LA5 508 aaPredicted RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 CDK5RAP1Q96SZ6 601 aaKnown RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 CLSTN3Q9BQT9 956 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 SIK2Q9H0K1 926 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 CATSPERBQ9H7T0 1116 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 SPG21Q9NZD8 308 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 LGALS13Q9UHV8 139 aa15.77■□□□□ 0.11
PSMC3-213ENST00000619920 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.77■□□□□ 0.11
PSMC3-213ENST00000619920 SMIM23A6NLE4 172 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 CDH16O75309 829 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
PSMC3-213ENST00000619920 ATF6P18850 670 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 LBX1P52954 281 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 PPP2R2AP63151 447 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 COG7P83436 770 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 BBS9Q3SYG4 887 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 DDX53Q86TM3 631 aaKnown RBP15.76■□□□□ 0.11
PSMC3-213ENST00000619920 TDRPQ86YL5 185 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 GPR65Q8IYL9 337 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 NPWQ8N729 165 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 COLGALT1Q8NBJ5 622 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 ZNF461Q8TAF7 563 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 OVCA2Q8WZ82 227 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 CAPS2Q9BXY5 557 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 CNOT10Q9H9A5 744 aaKnown RBP15.76■□□□□ 0.11
PSMC3-213ENST00000619920 VPS37BQ9H9H4 285 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 IL23AQ9NPF7 189 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 EIF2B3Q9NR50 452 aaKnown RBP15.76■□□□□ 0.11
PSMC3-213ENST00000619920 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 STK39Q9UEW8 545 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 FETUBQ9UGM5 382 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 SLC12A6Q9UHW9 1150 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 NUDT5Q9UKK9 219 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 NEU3Q9UQ49 428 aa15.76■□□□□ 0.11
PSMC3-213ENST00000619920 MRPL42Q9Y6G3 142 aaKnown RBP15.76■□□□□ 0.11
PSMC3-213ENST00000619920 SPAG6O75602 509 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms