RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SLC8B1Q6J4K2 584 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 BZW1Q7L1Q6 419 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 ARFGAP2Q8N6H7 521 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 NAT8LQ8N9F0 302 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 PKNOX2Q96KN3 472 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 SERPINB11Q96P15 392 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 OLFM3Q96PB7 478 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 IL37Q9NZH6 218 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 SEPT10Q9P0V9 454 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 F5H423 210 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 NDUFAB1O14561 156 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 PAGE1O75459 146 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 TBX18O95935 607 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 SOD2P04179 222 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 VAV1P15498 845 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CHN1P15882 459 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CA8P35219 290 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 GLUD2P49448 558 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 PDIA2Q13087 525 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 HIF1AQ16665 826 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 BRMS1LQ5PSV4 323 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CENPUQ71F23 418 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 MIB1Q86YT6 1006 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 ANKMY2Q8IV38 441 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 ZBED8Q8IZ13 594 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 COLGALT1Q8NBJ5 622 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 HTR3CQ8WXA8 447 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CLSTN3Q9BQT9 956 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CEP41Q9BYV8 373 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 FOXP3Q9BZS1 431 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 EPN3Q9H201 632 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 ARHGEF38Q9NXL2 777 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 PIAS1O75925 651 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 PSEN1P49768 467 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.315e-8■■■■□ 23.6
TNFAIP3-209ENST00000619035 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 C10orf120Q5SQS8 335 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CEP128Q6ZU80 1094 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 EXOC3L1Q86VI1 746 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 CCDC13Q8IYE1 715 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 NPWQ8N729 165 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 RTP4Q96DX8 246 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 MRRFQ96E11 262 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 TMEM109Q9BVC6 243 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 PRDM12Q9H4Q4 367 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 PRKAG2Q9UGJ0 569 aa13.09□□□□□ -0.31
TNFAIP3-209ENST00000619035 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 PPP1R12AO14974 1030 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZNF189O75820 626 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 PPM1AP35813 382 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 ARL4CP56559 192 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 EIF4EBP2Q13542 120 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 PDK1Q15118 436 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 FNBP1LQ5T0N5 605 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 NLRP14Q86W24 1093 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 FCRL2Q96LA5 508 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 CCT8L2Q96SF2 557 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 KLC2Q9H0B6 622 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 SPG21Q9NZD8 308 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 PLXNA3P51805 1871 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 HACD1B0YJ81 288 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 AGTP01019 485 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 URODP06132 367 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 APRTP07741 180 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 HMBSP08397 361 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 HCAR3P49019 387 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 TBX4P57082 545 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 PDZD4Q76G19 769 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZNF473Q8WTR7 871 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 P2RY11Q96G91 374 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 CYP4F11Q9HBI6 524 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 MLXIPLQ9NP71 852 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 TLR6Q9Y2C9 796 aa13.08□□□□□ -0.32
TNFAIP3-209ENST00000619035 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 SEC24AO95486 1093 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 METTL18O95568 372 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 MMP13P45452 471 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 TUFMP49411 452 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 DSG1Q02413 1049 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 KCNJ11Q14654 390 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 PPP2R5DQ14738 602 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 QPCTQ16769 361 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 BBS9Q3SYG4 887 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 TNFAIP8L3Q5GJ75 292 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 TPGS2Q68CL5 300 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 DDX53Q86TM3 631 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms