RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 PYROXD2Q8N2H3 581 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 PHTF2Q8N3S3 785 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 COLGALT1Q8NBJ5 622 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 C11orf84Q9BUA3 381 aaPredicted RBP20.96■□□□□ 0.95
NEK3-208ENST00000618534 CEP41Q9BYV8 373 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 ZNF358Q9NW07 568 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 SF3B1O75533 1304 aaKnown RBP eCLIP20.96■□□□□ 0.95
NEK3-208ENST00000618534 LOC100653049A0A140TA62 436 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 ZMPSTE24O75844 475 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 KRT34O76011 436 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 ALOX15P16050 662 aaPredicted RBP20.96■□□□□ 0.95
NEK3-208ENST00000618534 GOT1P17174 413 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 PGAM1P18669 254 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 GSTT1P30711 240 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 FDFT1P37268 417 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 PTPN9P43378 593 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 ABCE1P61221 599 aaKnown RBP20.96■□□□□ 0.95
NEK3-208ENST00000618534 ITGA9Q13797 1035 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 CNPY1Q3B7I2 92 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 TCHHL1Q5QJ38 904 aaPredicted RBP20.96■□□□□ 0.95
NEK3-208ENST00000618534 RASIP1Q5U651 963 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 LRRC8BQ6P9F7 803 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 FRMD7Q6ZUT3 714 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 HPS6Q86YV9 775 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 KIF12Q96FN5 646 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 SMARCAD1Q9H4L7 1026 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 PIM2Q9P1W9 311 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 PTPRFP10586 1907 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 DGKIO75912 1065 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 TOMM70O94826 608 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 RALBP11234 206 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 CUL3Q13618 768 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 LIN52Q52LA3 116 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 CES3Q6UWW8 571 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 TTC39CQ8N584 583 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 GDPD5Q8WTR4 605 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 OLFM3Q96PB7 478 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 CCDC28BQ9BUN5 200 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 OXCT2Q9BYC2 517 aaPredicted RBP20.95■□□□□ 0.94
NEK3-208ENST00000618534 KLHL4Q9C0H6 718 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 SYBUQ9NX95 663 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 POMPQ9Y244 141 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 PPEF2O14830 753 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 STAU1O95793 577 aaKnown RBP20.95■□□□□ 0.94
NEK3-208ENST00000618534 SETSIPP0DME0 302 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 SOWAHAQ2M3V2 549 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 NOL9Q5SY16 702 aaKnown RBP20.95■□□□□ 0.94
NEK3-208ENST00000618534 AFG1LQ8WV93 481 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 JADE3Q92613 823 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 CMTM5Q96DZ9 223 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 PGLYRP2Q96PD5 576 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 SPATA16Q9BXB7 569 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 CXCL16Q9H2A7 254 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 SNX9Q9Y5X1 595 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 SCN1AP35498 2009 aa20.95■□□□□ 0.94
NEK3-208ENST00000618534 ERVK-10P10266 1014 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 MYL4P12829 197 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 TYK2P29597 1187 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 HARS2P49590 506 aaKnown RBP20.94■□□□□ 0.94
NEK3-208ENST00000618534 CMC1Q7Z7K0 106 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 APOBEC3FQ8IUX4 373 aaKnown RBP20.94■□□□□ 0.94
NEK3-208ENST00000618534 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 CENPIQ92674 756 aaPredicted RBP20.94■□□□□ 0.94
NEK3-208ENST00000618534 FAM96AQ9H5X1 160 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 USP3Q9Y6I4 520 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 RNF103O00237 685 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 DCXO43602 365 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 MFSD11O43934 449 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 VTNP04004 478 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 UQCRBP14927 111 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 SERPINB6P35237 376 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 MLH1P40692 756 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 DEUP1Q05D60 604 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 TBL3Q12788 808 aaKnown RBP20.94■□□□□ 0.94
NEK3-208ENST00000618534 USP4Q13107 963 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 ST13P4Q8IZP2 240 aaPredicted RBP20.94■□□□□ 0.94
NEK3-208ENST00000618534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.94■□□□□ 0.94
NEK3-208ENST00000618534 AKT3Q9Y243 479 aa20.94■□□□□ 0.94
NEK3-208ENST00000618534 CITO14578 2027 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.93■□□□□ 0.94
NEK3-208ENST00000618534 HCRTO43612 131 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 RAG1P15918 1043 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 SLC26A2P50443 739 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 DLG1Q12959 904 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 MED21Q13503 144 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 NAB1Q13506 487 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 TRIP10Q15642 601 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 INSCQ1MX18 579 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 ARHGAP18Q8N392 663 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 CENPKQ9BS16 269 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 VCX3BQ9H321 246 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 MAN1C1Q9NR34 630 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 ETAA1Q9NY74 926 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 GTF2IRD1Q9UHL9 959 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 ZBTB14O43829 449 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 F7P08709 466 aaPredicted RBP20.93■□□□□ 0.94
NEK3-208ENST00000618534 CPA3P15088 417 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 PSMB4P28070 264 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 ZDHHC17Q8IUH5 632 aa20.93■□□□□ 0.94
NEK3-208ENST00000618534 TNS4Q8IZW8 715 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms