RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PP2D1A8MPX8 630 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 PRAMEF26H0Y7S4 382 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 KLK10O43240 276 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 RNASEH1O60930 286 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 EPHX1P07099 455 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 DLDP09622 509 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 LIPCP11150 499 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 RALAP11233 206 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 CASRP41180 1078 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 TNNC1P63316 161 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 NNTQ13423 1086 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 SLC12A1Q13621 1099 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 LY6DQ14210 128 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 HNRNPA1L2Q32P51 320 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 CRTC2Q53ET0 693 aaPredicted RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 MSANTD2Q6P1R3 559 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 SERPINA13PQ6UXR4 307 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 FUKQ8N0W3 1084 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 WDR36Q8NI36 951 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 LARP4BQ92615 738 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 MRGPRX3Q96LB0 322 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 CUEDC1Q9NWM3 386 aaPredicted RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 ARHGAP20Q9P2F6 1191 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 GGA2Q9UJY4 613 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 AGO1Q9UL18 857 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 ZFYVE26Q68DK2 2539 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 C2orf72A6NCS6 295 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 NTN3O00634 580 aaPredicted RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 TRIM24O15164 1050 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 SIGLEC6O43699 453 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 STX6O43752 255 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 DDAH2O95865 285 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 ATP5BP06576 529 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 RARGP13631 454 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CCKBRP32239 447 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 DDIT3P35638 169 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 ADPRHP54922 357 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CST6Q15828 149 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CCDC142Q17RM4 750 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 ZCCHC8Q6NZY4 707 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 EPM2AIP1Q7L775 607 aaPredicted RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 TRAPPC11Q7Z392 1133 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 TMEM145Q8NBT3 493 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 DNAJC19Q96DA6 116 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 BOCQ9BWV1 1114 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 OSER1Q9NX31 292 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 ENTPD2Q9Y5L3 495 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 SCAMP1O15126 338 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 MAPK13O15264 365 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 NVLO15381 856 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 EFSO43281 561 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 HCRTO43612 131 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 JAK2O60674 1132 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 FSBPO95073 299 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 RPN1P04843 607 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 P4HA1P13674 534 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 SLC6A4P31645 630 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CDR1P51861 262 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 PLK1P53350 603 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 TBR1Q16650 682 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 FNDC3BQ53EP0 1204 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 SETMARQ53H47 684 aaPredicted RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 PM20D1Q6GTS8 502 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 ABI3BPQ7Z7G0 1075 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 PRPF39Q86UA1 669 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 GPBAR1Q8TDU6 330 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 KCTD13Q8WZ19 329 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 MIB2Q96AX9 1013 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CATSPER2Q96P56 530 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 DPEP3Q9H4B8 488 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 EBF2Q9HAK2 575 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CYP3A43Q9HB55 503 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 POLD4Q9HCU8 107 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 PCDHB1Q9Y5F3 818 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 FASNP49327 2511 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 CFAP46Q8IYW2 2715 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 TRIM38O00635 465 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 USP12O75317 370 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 AP1G2O75843 785 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 PIAS2O75928 621 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 PRPF6O94906 941 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 KLKB1P03952 638 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 FAM200BP0CF97 657 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 PABPC1P11940 636 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 PNLIPP16233 465 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 ITGB7P26010 798 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CORO1AP31146 461 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 KIF11P52732 1056 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 OXCT1P55809 520 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 CYP24A1Q07973 514 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 MTA1Q13330 715 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 HS1BP3Q53T59 392 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 C9orf64Q5T6V5 341 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 KYAT3Q6YP21 454 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 BEND5Q7L4P6 421 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 PRICKLE2Q7Z3G6 844 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 SCD5Q86SK9 330 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 SFR1Q86XK3 245 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 OR5B17Q8NGF7 314 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms