RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TATDN2Q93075 761 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 C12orf66Q96MD2 445 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 AASSQ9UDR5 926 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 PCDHB8Q9UN66 801 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
COL5A1-208ENST00000618395 ERCC2P18074 760 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 CCNG1P51959 295 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 ARHGEF6Q15052 776 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 PARP6Q2NL67 630 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 IQCF2Q8IXL9 164 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 MAGEE1Q9HCI5 957 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 NEDD4P46934 1319 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 TMEM114B3SHH9 223 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 ZC3H11AO75152 810 aaKnown RBP eCLIP15.33■□□□□ 0.05
COL5A1-208ENST00000618395 AAGABQ6PD74 315 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 EIF3KQ9UBQ5 218 aaKnown RBP15.33■□□□□ 0.05
COL5A1-208ENST00000618395 ZDHHC9Q9Y397 364 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 GNAO1P09471 354 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 CDH4P55283 916 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 TOB2Q14106 344 aaPredicted RBP15.33■□□□□ 0.05
COL5A1-208ENST00000618395 SHC4Q6S5L8 630 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 SLC26A11Q86WA9 606 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 HPS6Q86YV9 775 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 RNF148Q8N7C7 305 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 FBXO36Q8NEA4 188 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 CPA5Q8WXQ8 436 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 APOL5Q9BWW9 433 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 SPAG4Q9NPE6 437 aa15.33■□□□□ 0.05
COL5A1-208ENST00000618395 SNAPC5O75971 98 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 STAT3P40763 770 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 RPP38P78345 283 aaKnown RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 KCTD1Q719H9 257 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 TFB1MQ8WVM0 346 aaKnown RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 EXD2Q9NVH0 621 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 ADPRHL2Q9NX46 363 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 FARP1Q9Y4F1 1045 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 FANCAO15360 1455 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 MGAT4DA6NG13 374 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 VPS4BO75351 444 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 ZNF267Q14586 743 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 HKDC1Q2TB90 917 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 TCP10LQ8TDR4 215 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 AENQ8WTP8 325 aaKnown RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 XPR1Q9UBH6 696 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 GRIP1Q9Y3R0 1128 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 SNX3O60493 162 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 NNMTP40261 264 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 GPR1P46091 355 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 CDK7P50613 346 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 FAXCQ5TGI0 409 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 POLIQ9UNA4 740 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 SDR42E2A6NKP2 422 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 PTGER2P43116 358 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 PIK3CGP48736 1102 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 MTERF2Q49AM1 385 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 FNBP1LQ5T0N5 605 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 GANCQ8TET4 914 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 SLC39A3Q9BRY0 314 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 C21orf2O43822 256 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 VCLP18206 1134 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 HIST2H2ACQ16777 129 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 HIST2H2AA3Q6FI13 130 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 KIAA1841Q6NSI8 718 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 R3HCC1LQ7Z5L2 792 aaKnown RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 NIM1KQ8IY84 436 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 EIF1ADQ8N9N8 165 aaKnown RBP15.33■□□□□ 0.04
COL5A1-208ENST00000618395 TEX47Q8TBZ9 253 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 APOPT1Q96IL0 206 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 C8orf37Q96NL8 207 aa15.33■□□□□ 0.04
COL5A1-208ENST00000618395 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RGS10O43665 173 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 CPNE3O75131 537 aaKnown RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ETS1P14921 441 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 SSTR3P32745 418 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 VMACQ2NL98 169 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 INO80EQ8NBZ0 244 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 AKAP1Q92667 903 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ARMC7Q9H6L4 198 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MORF4L1Q9UBU8 362 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RBP1P09455 135 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 DSG3P32926 999 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 CDC42P60953 191 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MAD2L1Q13257 205 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 DLGAP5Q15398 846 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 NAPEPLDQ6IQ20 393 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 COMMD2Q86X83 199 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RACGAP1Q9H0H5 632 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ZSCAN5BA6NJL1 495 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 PLK4O00444 970 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RBP3P10745 1247 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ZNF14P17017 642 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RGS1Q08116 209 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ZIK1Q3SY52 487 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 CABLES1Q8TDN4 633 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ZNF350Q9GZX5 532 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms