RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 AGO1Q9UL18 857 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ARHGAP26Q9UNA1 814 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CCL26Q9Y258 94 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 SZT2Q5T011 3432 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 MYOFQ9NZM1 2061 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 GOLGA6L7A0A1B0GV03 622 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 E9PAM4 449 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 EEF2KO00418 725 aaKnown RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 CST8O60676 142 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 TJP3O95049 919 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 PRAMEF12O95522 483 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 LATS1O95835 1130 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 TCF3P15923 654 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 TACR2P21452 398 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 HOXC13P31276 330 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 SLC6A4P31645 630 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 HTR7P34969 479 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 MTHFRP42898 656 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 SLC11A2P49281 568 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 TPI1P60174 286 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 CKAP4Q07065 602 aaKnown RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 DPYSQ14117 519 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 TFDP2Q14188 446 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 SIX1Q15475 284 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 C5orf22Q49AR2 442 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 FAM133BQ5BKY9 247 aaKnown RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 ADGRF1Q5T601 910 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 KAZNQ674X7 775 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 RAP1GAP2Q684P5 730 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 SLC9A4Q6AI14 798 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 Q6ZNB5 142 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 RFX8Q6ZV50 586 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 BBS12Q6ZW61 710 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 HTR3DQ70Z44 454 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 GET4Q7L5D6 327 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 ADAT2Q7Z6V5 191 aaKnown RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 CHSY1Q86X52 802 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 DDX42Q86XP3 938 aaKnown RBP eCLIP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 RFX6Q8HWS3 928 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 ARID3BQ8IVW6 561 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 NPAS3Q8IXF0 933 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 RIN3Q8TB24 985 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 FGF13Q92913 245 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 GUCD1Q96NT3 240 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 EPAS1Q99814 870 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 CARD6Q9BX69 1037 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 PRDM16Q9HAZ2 1276 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 ARHGEF4Q9NR80 690 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 ETNK2Q9NVF9 386 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 CFAP97Q9P2B7 532 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 PPARGC1AQ9UBK2 798 aaKnown RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 STOML2Q9UJZ1 356 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 LSM7Q9UK45 103 aaKnown RBP8.33□□□□□ -1.08
TARDBP-219ENST00000617757 VANGL2Q9ULK5 521 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 NEU3Q9UQ49 428 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 ZNF510Q9Y2H8 683 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 SH3BP1Q9Y3L3 701 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 NR2E1Q9Y466 385 aa8.33□□□□□ -1.08
TARDBP-219ENST00000617757 IGLV3-10A0A075B6K4 115 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-219ENST00000617757 E2F8A0AVK6 867 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 DRGXA6NNA5 263 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 F5H5T6 163 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 KRIT1O00522 736 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 RIOK3O14730 519 aaKnown RBP8.32□□□□□ -1.08
TARDBP-219ENST00000617757 APOL1O14791 398 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 DAPK3O43293 454 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 FOSL2P15408 326 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 ERCC2P18074 760 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 EPHB2P29323 1055 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 DYNLT1P63172 113 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 USP4Q13107 963 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 PAFAH1B3Q15102 231 aaKnown RBP8.32□□□□□ -1.08
TARDBP-219ENST00000617757 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-219ENST00000617757 ZNF77Q15935 545 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 FBXL22Q6P050 247 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 LRRC31Q6UY01 552 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 BBS7Q8IWZ6 715 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 FAM217AQ8IXS0 508 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 LGI2Q8N0V4 545 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 PLD5Q8N7P1 536 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 CEP112Q8N8E3 955 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 SMRP1Q8NCR6 262 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 SPATA4Q8NEY3 305 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 ZSCAN18Q8TBC5 510 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-219ENST00000617757 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-219ENST00000617757 SH3RF2Q8TEC5 729 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 SMARCD2Q92925 531 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 IGSF8Q969P0 613 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 TBC1D31Q96DN5 1066 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 MYEOVQ96EZ4 313 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 ASB16Q96NS5 453 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 AP1M1Q9BXS5 423 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 ZYG11BQ9C0D3 744 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 KIF9Q9HAQ2 790 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 GDE1Q9NZC3 331 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 STIM2Q9P246 746 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 CD207Q9UJ71 328 aa8.32□□□□□ -1.08
TARDBP-219ENST00000617757 CDH7Q9ULB5 785 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms