RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 DEFB119Q8N690 84 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 KDM1BQ8NB78 822 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SORCS1Q8WY21 1168 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 TTC17Q96AE7 1141 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 ERLEC1Q96DZ1 483 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 BTN2A3PQ96KV6 586 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 FCRL2Q96LA5 508 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-218ENST00000617172 CNTNAP3BQ96NU0 1288 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 PPP1R9BQ96SB3 815 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 CLSTN2Q9H4D0 955 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 TMEM51Q9NW97 253 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.04□□□□□ -0.8
TARDBP-218ENST00000617172 ASNSD1Q9NWL6 643 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 CEP83Q9Y592 693 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SPTBN2O15020 2390 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 EML5Q05BV3 1969 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 MYO18AQ92614 2054 aaKnown RBP10.03□□□□□ -0.8
TARDBP-218ENST00000617172 GOLGA6L7A0A1B0GV03 622 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 BECN2A8MW95 431 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 MEI4A8MW99 385 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 E5RJQ4 531 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 OPHN1O60890 802 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 MOCS3O95396 460 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 TRUB2O95900 331 aaKnown RBP10.03□□□□□ -0.8
TARDBP-218ENST00000617172 SLC6A4P31645 630 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 RDXP35241 583 aaKnown RBP10.03□□□□□ -0.8
TARDBP-218ENST00000617172 MAPK8P45983 427 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 OXCT1P55809 520 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 CDK17Q00537 523 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 PDCLQ13371 301 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 CDH18Q13634 790 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 ARID5BQ14865 1188 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 PTPRNQ16849 979 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 PLEKHG6Q3KR16 790 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 DCAF6Q58WW2 860 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 MS4A13Q5J8X5 152 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 SYPL2Q5VXT5 272 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 NADSYN1Q6IA69 706 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 GJB7Q6PEY0 223 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 ATP6V0D2Q8N8Y2 350 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 CYB5D2Q8WUJ1 264 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 PPP1R13BQ96KQ4 1090 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 GTPBP2Q9BX10 602 aaKnown RBP10.03□□□□□ -0.8
TARDBP-218ENST00000617172 GPR174Q9BXC1 333 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 NDST4Q9H3R1 872 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 KIAA1522Q9P206 1035 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-218ENST00000617172 STIM2Q9P246 746 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 TJP2Q9UDY2 1190 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 DNAJC12Q9UKB3 198 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 SCML1Q9UN30 329 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 ATXN2Q99700 1313 aaKnown RBP10.03□□□□□ -0.8
TARDBP-218ENST00000617172 THADAQ6YHU6 1953 aa10.03□□□□□ -0.8
TARDBP-218ENST00000617172 A0A1B0GTW7 788 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 KCNU1A8MYU2 1149 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 KCNJ18B7U540 433 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 H0Y626 953 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 FOXN3O00409 490 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 HSF2BPO75031 334 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 LUC7L3O95232 432 aaKnown RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 MOCS2O96007 188 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 IGLV3-25P01717 112 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 DNTTP04053 509 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 SRPRAP08240 638 aaKnown RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 HLA-EP13747 358 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 ABCB4P21439 1286 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 CCR1P32246 355 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 CD70P32970 193 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 NNMTP40261 264 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 SGSHP51688 502 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 RPS24P62847 133 aaKnown RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 SEMA3BQ13214 749 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 EIF4EBP2Q13542 120 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 SLC12A1Q13621 1099 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 TTC31Q49AM3 519 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 VWA3BQ502W6 1294 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 ZC3H12AQ5D1E8 599 aaKnown RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 TTC39BQ5VTQ0 682 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 IL27RAQ6UWB1 636 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 CLEC17AQ6ZS10 378 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 C11orf57Q6ZUT1 292 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 TAC4Q86UU9 113 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 ZDHHC17Q8IUH5 632 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 CARNMT1Q8N4J0 409 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 WDTC1Q8N5D0 677 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 MINDY1Q8N5J2 469 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 ADAM32Q8TC27 787 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 LMLNQ96KR4 655 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 BTBD1Q9H0C5 482 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 NUP62CLQ9H1M0 184 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 PRSS16Q9NQE7 514 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 DNAAF2Q9NVR5 837 aaKnown RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 CYTH4Q9UIA0 394 aa10.02□□□□□ -0.81
TARDBP-218ENST00000617172 CNOT1A5YKK6 2376 aaKnown RBP10.02□□□□□ -0.81
TARDBP-218ENST00000617172 TARSL2A2RTX5 802 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms