RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 APBB2Q92870 758 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 CWH43Q9H720 699 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 CCSER2Q9H7U1 834 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 KIF9Q9HAQ2 790 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 ABCC13Q9NSE7 274 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 FNDC1Q4ZHG4 1894 aaPredicted RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 CLUHO75153 1309 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 BCLAF3A2AJT9 711 aaKnown RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 HMGB1P1B2RPK0 211 aaPredicted RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 H3BRJ5 948 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 SYN3O14994 580 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 DCLK1O15075 740 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 F7P08709 466 aaPredicted RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 COL6A1P12109 1028 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 LRRC14Q15048 493 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 ARL13BQ3SXY8 428 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 ANKRD20A2Q5SQ80 823 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 ANKRD20A1Q5TYW2 823 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 ANKRD20A3Q5VUR7 823 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 CENPUQ71F23 418 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 TFAP2DQ7Z6R9 452 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 PDCD7Q8N8D1 485 aaKnown RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 CCHCR1Q8TD31 782 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 FBXO32Q969P5 355 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 FCRL2Q96LA5 508 aaPredicted RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 IL1RAPL1Q9NZN1 696 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 DFFAO00273 331 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 ATF6P18850 670 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 GCAP28676 217 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 EIF3BP55884 814 aaKnown RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 PSMD5Q16401 504 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 NFE2Q16621 373 aaPredicted RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 KDELC2Q7Z4H8 507 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 EXOC3L1Q86VI1 746 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 CIR1Q86X95 450 aaPredicted RBP8.03□□□□□ -1.12
NEK3-207ENST00000617054 LRRC43Q8N309 656 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 CFAP36Q96G28 342 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 SERPINB12Q96P63 405 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 VANGL2Q9ULK5 521 aa8.03□□□□□ -1.12
NEK3-207ENST00000617054 EXOC1LA0A1B0GW35 172 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 E7EVH7 732 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 RNF103O00237 685 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 ALOX15BO15296 676 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 IRAK2O43187 625 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 SEC24AO95486 1093 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 RAG1P15918 1043 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 ARL4CP56559 192 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 SEMA3BQ13214 749 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 KCNJ11Q14654 390 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 TMED2Q15363 201 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 LRRC31Q6UY01 552 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 LEKR1Q6ZMV7 388 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 ARHGEF18Q6ZSZ5 1173 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 PID1Q7Z2X4 250 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 CAND1Q86VP6 1230 aaKnown RBP8.02□□□□□ -1.12
NEK3-207ENST00000617054 PALM2Q8IXS6 379 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 UNC5BQ8IZJ1 945 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 ZNF567Q8N184 647 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 COLGALT1Q8NBJ5 622 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 MYEOVQ96EZ4 313 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 OLFM3Q96PB7 478 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 APOL2Q9BQE5 337 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 SHOC2Q9UQ13 582 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 MAD1L1Q9Y6D9 718 aa8.02□□□□□ -1.12
NEK3-207ENST00000617054 GOLGA6L7A0A1B0GV03 622 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 ARHGEF37A1IGU5 675 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 ZBBXA8MT70 800 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 TRDMT1O14717 391 aaKnown RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 FAM155BO75949 473 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 YWHAQP27348 245 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 PSMB4P28070 264 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 GJA8P48165 433 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 IFNAR2P48551 515 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 PPP2R2AP63151 447 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 WASHC5Q12768 1159 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 GPR17Q13304 367 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 BTG3Q14201 252 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 C10orf120Q5SQS8 335 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 CES3Q6UWW8 571 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 PRPF39Q86UA1 669 aaKnown RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 HOOK3Q86VS8 718 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 SRRM1Q8IYB3 904 aaKnown RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 PDIK1LQ8N165 341 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 FBF1Q8TES7 1133 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 IRGQQ8WZA9 623 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 ARHGEF2Q92974 986 aaKnown RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 TOP1MTQ969P6 601 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 IGSF21Q96ID5 467 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 KLF6Q99612 283 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 NCAPGQ9BPX3 1015 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 CLSTN3Q9BQT9 956 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 FRMD8P1Q9BZ68 369 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 KCNK9Q9NPC2 374 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 PAK5Q9P286 719 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 HS3ST4Q9Y661 456 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 CCDC78A2IDD5 438 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 GOLGA8RI6L899 631 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 SPAG7O75391 227 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 F9P00740 461 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms