RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 M0QYV0 167 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 LSM1O15116 133 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 KDM1AO60341 852 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 PLIN3O60664 434 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 USP12O75317 370 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 CLIC3O95833 236 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 NR4A1P22736 598 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 MPSTP25325 297 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 HALP42357 657 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 SERPINB9P50453 376 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 KPNA1P52294 538 aaPredicted RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 EMP3P54852 163 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 BNIP3Q12983 259 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 ZNF699Q32M78 642 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 PERM1Q5SV97 790 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 CHST15Q7LFX5 561 aaPredicted RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 ERI1Q8IV48 349 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 LILRA2Q8N149 483 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 TTC16Q8NEE8 873 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 CXorf38Q8TB03 319 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 GMCL1Q96IK5 515 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 HEXIM2Q96MH2 286 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 COA1Q9GZY4 146 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 C17orf75Q9HAS0 396 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 POPDC2Q9HBU9 364 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 XPNPEP3Q9NQH7 507 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 COL20A1Q9P218 1284 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 TRPC5Q9UL62 973 aaPredicted RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 CDY2AQ9Y6F7 541 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 CDY1Q9Y6F8 540 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 UBR2Q8IWV8 1755 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 PLIN4Q96Q06 1357 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 ZNF541Q9H0D2 1346 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 AHDC1Q5TGY3 1603 aaPredicted RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 FAM149AA5PLN7 773 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 SLC15A5A6NIM6 579 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 PLSCR1O15162 318 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 SPTLC1O15269 473 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 RNASEH2AO75792 299 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 BBOX1O75936 387 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 C4BPAP04003 597 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 CHRNGP07510 517 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 MAPTP10636 758 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 FGF3P11487 239 aaPredicted RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 NDST2P52849 883 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 PRPSAP1Q14558 356 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 DLG2Q15700 870 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 Q3C1V9 767 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 EGFLAMQ63HQ2 1017 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 MBLAC2Q68D91 279 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 PGM2L1Q6PCE3 622 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 SH3BP5LQ7L8J4 393 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 ARCQ7LC44 396 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 UBR7Q8N806 425 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 DNAAF3Q8N9W5 541 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 ADCY4Q8NFM4 1077 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 MAPK15Q8TD08 544 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 COX4I2Q96KJ9 171 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 MPHOSPH6Q99547 160 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 AGO4Q9HCK5 861 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 GTSE1Q9NYZ3 720 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 FAM198AQ9UFP1 575 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 WARS2Q9UGM6 360 aaKnown RBP6.84□□□□□ -1.31
LMO3-235ENST00000616247 PSAT1Q9Y617 370 aa6.84□□□□□ -1.31
LMO3-235ENST00000616247 ZBBXA8MT70 800 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 FBP2O00757 339 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 APOL1O14791 398 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 PPEF1O14829 653 aaPredicted RBP6.84□□□□□ -1.32
LMO3-235ENST00000616247 BIRC5O15392 142 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 DENRO43583 198 aaKnown RBP6.84□□□□□ -1.32
LMO3-235ENST00000616247 SNNO75324 88 aaPredicted RBP6.84□□□□□ -1.32
LMO3-235ENST00000616247 GPC4O75487 556 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 TIPRLO75663 272 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 H6PDO95479 791 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 METTL18O95568 372 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 COL6A2P12110 1019 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 CCDC130P13994 396 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 NFKBIAP25963 317 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 MGAT1P26572 445 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 HMOX2P30519 316 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 AVPR1AP37288 418 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 TNFSF9P41273 254 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 GABRB2P47870 512 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 NME5P56597 212 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 GNA12Q03113 381 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 NME3Q13232 169 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 CEACAM7Q14002 265 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 CARTPTQ16568 116 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 TRIM16LQ309B1 348 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 PITRM1Q5JRX3 1037 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 MAVSQ7Z434 540 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 IFNEQ86WN2 208 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 PDZD8Q8NEN9 1154 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 RXFP2Q8WXD0 754 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 C12orf43Q96C57 262 aaKnown RBP6.84□□□□□ -1.32
LMO3-235ENST00000616247 CPXM1Q96SM3 734 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 GPATCH1Q9BRR8 931 aaKnown RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms