RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.73■□□□□ 0.75
CDX1-202ENST00000616154 KNL1Q8NG31 2342 aa19.73■□□□□ 0.75
CDX1-202ENST00000616154 MSI1O43347 362 aaKnown RBP19.72■□□□□ 0.75
CDX1-202ENST00000616154 HLA-EP13747 358 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 LCP1P13796 627 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 TRIP6Q15654 476 aaKnown RBP19.72■□□□□ 0.75
CDX1-202ENST00000616154 MEA1Q16626 185 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 CHST9Q7L1S5 443 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 ENOSF1Q7L5Y1 443 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 ADIPOR2Q86V24 386 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 CACUL1Q86Y37 369 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 SLC35F5Q8WV83 523 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 IRGQQ8WZA9 623 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 CAMK1GQ96NX5 476 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 MIR1-1HGQ9H1L0 117 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 THAP9Q9H5L6 903 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 PCDHB4Q9Y5E5 795 aa19.72■□□□□ 0.75
CDX1-202ENST00000616154 SYCE3A1L190 88 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 BCAT2O15382 392 aaPredicted RBP19.71■□□□□ 0.75
CDX1-202ENST00000616154 GABBR2O75899 941 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 IGLV3-27P01718 113 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 FNDC3BQ53EP0 1204 aaKnown RBP19.71■□□□□ 0.75
CDX1-202ENST00000616154 TRIM65Q6PJ69 517 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 RRAGAQ7L523 313 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 AHI1Q8N157 1196 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 CHCHD4Q8N4Q1 142 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 C1orf216Q8TAB5 229 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 CYB5D2Q8WUJ1 264 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 FAM81BQ96LP2 452 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 LHX5Q9H2C1 402 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 FBRSQ9HAH7 460 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 ABCB8Q9NUT2 735 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 GGA2Q9UJY4 613 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 PLA2G4CQ9UP65 541 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 PCDHB9Q9Y5E1 797 aa19.71■□□□□ 0.75
CDX1-202ENST00000616154 ANKRD11Q6UB99 2663 aaPredicted RBP19.7■□□□□ 0.74
CDX1-202ENST00000616154 DMXL2Q8TDJ6 3036 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 CABIN1Q9Y6J0 2220 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 SRRM3A6NNA2 597 aaPredicted RBP19.7■□□□□ 0.74
CDX1-202ENST00000616154 CER1O95813 267 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 ZNF883P0CG24 379 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 PABPC1P11940 636 aaKnown RBP19.7■□□□□ 0.74
CDX1-202ENST00000616154 RPL34P49207 117 aaKnown RBP19.7■□□□□ 0.74
CDX1-202ENST00000616154 RGS7P49802 495 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 SGSHP51688 502 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 PTPRNQ16849 979 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 MPP7Q5T2T1 576 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 NUGGCQ68CJ6 796 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 PMF1Q6P1K2 205 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 IL27RAQ6UWB1 636 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 EIF2B4Q9UI10 523 aaKnown RBP19.7■□□□□ 0.74
CDX1-202ENST00000616154 DACH1Q9UI36 760 aa19.7■□□□□ 0.74
CDX1-202ENST00000616154 TMEM131Q92545 1883 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 FTH1P19P0C7X4 201 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 PRKCSHP14314 528 aaPredicted RBP19.69■□□□□ 0.74
CDX1-202ENST00000616154 BNC1Q01954 994 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 TYRO3Q06418 890 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 RING1Q06587 406 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 MBLAC2Q68D91 279 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 SASS6Q6UVJ0 657 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 FAM124AQ86V42 546 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 UNC45BQ8IWX7 931 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 ZNF366Q8N895 744 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 ZNF557Q8N988 423 aaPredicted RBP19.69■□□□□ 0.74
CDX1-202ENST00000616154 ADAMTS14Q8WXS8 1223 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 AZIN2Q96A70 460 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 HSFY1Q96LI6 401 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 ANP32EQ9BTT0 268 aa19.69■□□□□ 0.74
CDX1-202ENST00000616154 RALYQ9UKM9 306 aaKnown RBP19.69■□□□□ 0.74
CDX1-202ENST00000616154 M0QYV0 167 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 IRAK2O43187 625 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 CBFA2T3O75081 653 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 LTFP02788 710 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 DLDP09622 509 aaKnown RBP19.68■□□□□ 0.74
CDX1-202ENST00000616154 MATKP42679 507 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 SLC11A2P49281 568 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 ZBTB16Q05516 673 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 STX1AQ16623 288 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 FAM133BQ5BKY9 247 aaKnown RBP19.68■□□□□ 0.74
CDX1-202ENST00000616154 PIK3R6Q5UE93 754 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 GBP6Q6ZN66 633 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 GLRX5Q86SX6 157 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 FAM114A1Q8IWE2 563 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 WFDC5Q8TCV5 224 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 C6orf106Q9H6K1 298 aaPredicted RBP19.68■□□□□ 0.74
CDX1-202ENST00000616154 GAREM1Q9H706 876 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 IL21RQ9HBE5 538 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 ANO10Q9NW15 660 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 APEX2Q9UBZ4 518 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 PCOLCE2Q9UKZ9 415 aa19.68■□□□□ 0.74
CDX1-202ENST00000616154 PLXNB3Q9ULL4 1909 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 PTPRBP23467 1997 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 PIK3R2O00459 728 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 ACSL4O60488 711 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 TBL1XO60907 577 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 FBXO21O94952 628 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 ATP5BP06576 529 aaKnown RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 BRD2P25440 801 aaKnown RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 SLC6A4P31645 630 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 CD70P32970 193 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms