RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 KLHL10Q6JEL2 608 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 RRAGAQ7L523 313 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 ARHGEF19Q8IW93 802 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 UNC45BQ8IWX7 931 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 HSFY1Q96LI6 401 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 PCED1AQ9H1Q7 454 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 FNDC3AQ9Y2H6 1198 aaKnown RBP21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 CBFA2T3O75081 653 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 CER1O95813 267 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 FYNP06241 537 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 POLR2EP19388 210 aaKnown RBP21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 MATKP42679 507 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 RPS14P62263 151 aaKnown RBP21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 CETN1Q12798 172 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 HLA-BQ31612 363 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 TTI2Q6NXR4 508 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 PKD1L2Q7Z442 2459 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 PNPLA1Q8N8W4 532 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 GOLGA1Q92805 767 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 PRICKLE1Q96MT3 831 aaPredicted RBP21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 IRX2Q9BZI1 471 aaPredicted RBP21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 MIS12Q9H081 205 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 PCOLCE2Q9UKZ9 415 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 LAMA5O15230 3695 aa21.59■■□□□ 1.05
TRAPPC3-208ENST00000616074 A0A1B0GVT2 93 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 P4HA2O15460 535 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 IRAK2O43187 625 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 FBXO21O94952 628 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 ATP5BP06576 529 aaKnown RBP21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 ZNF883P0CG24 379 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 BMP6P22004 513 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 GCNT1Q02742 428 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 IL27RAQ6UWB1 636 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 MFN1Q8IWA4 741 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 DQX1Q8TE96 717 aaKnown RBP21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 NELFBQ8WX92 580 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 AZIN2Q96A70 460 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 MYEOVQ96EZ4 313 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 LMLNQ96KR4 655 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 FCRL2Q96LA5 508 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 MTG2Q9H4K7 406 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 FBRSQ9HAH7 460 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 TM7SF3Q9NS93 570 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 STIM2Q9P246 746 aa21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC3-208ENST00000616074 PLXNB3Q9ULL4 1909 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 DSPP15924 2871 aaKnown RBP21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 PPP1R3GB7ZBB8 358 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 DNTTP04053 509 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 PPP1R2P41236 205 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 CSNK1EP49674 416 aaKnown RBP21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 ZBTB16Q05516 673 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 ELOA2Q8IYF1 753 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 HJURPQ8NCD3 748 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 EHBP1Q8NDI1 1231 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 SETD7Q8WTS6 366 aaKnown RBP21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 ADAMTS14Q8WXS8 1223 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 MYO19Q96H55 970 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 KREMEN1Q96MU8 473 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 SERPINB11Q96P15 392 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 BTBD1Q9H0C5 482 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 CTNND2Q9UQB3 1225 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 NAALADL1Q9UQQ1 740 aa21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 NYNRINQ9P2P1 1898 aaKnown RBP21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 TP53BP1Q12888 1972 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC3-208ENST00000616074 PTPRBP23467 1997 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 SEMA4FO95754 770 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 GPD2P43304 727 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 RPL34P49207 117 aaKnown RBP21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 AFF3P51826 1226 aaKnown RBP21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 RPS24P62847 133 aaKnown RBP21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 NUCB2P80303 420 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 GLRX5Q86SX6 157 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 SCUBE3Q8IX30 993 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 ZNF557Q8N988 423 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 FIBINQ8TAL6 211 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 ADAM32Q8TC27 787 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 TTC17Q96AE7 1141 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 BIRC7Q96CA5 298 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 NUCKS1Q9H1E3 243 aaKnown RBP21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 ST7Q9NRC1 585 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 SUN2Q9UH99 717 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 INTS6Q9UL03 887 aaKnown RBP21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 TLR6Q9Y2C9 796 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 PLXNA2O75051 1894 aa21.56■■□□□ 1.04
TRAPPC3-208ENST00000616074 KNL1Q8NG31 2342 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 ZFYVE26Q68DK2 2539 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 CSKP41240 450 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 KCNH2Q12809 1159 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 KIF19Q2TAC6 998 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 TTC31Q49AM3 519 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 ZNF776Q68DI1 518 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 FOXR2Q6PJQ5 311 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 SLCO6A1Q86UG4 719 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 TRIM59Q8IWR1 403 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 CARNMT1Q8N4J0 409 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 BAHD1Q8TBE0 780 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 FAM149B1Q96BN6 582 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 SLC39A13Q96H72 371 aa21.55■■□□□ 1.04
TRAPPC3-208ENST00000616074 DDX50Q9BQ39 737 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms