RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CYP3A43Q9HB55 503 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 UBQLN1Q9UMX0 589 aaKnown RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 CEP152O94986 1710 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 A0A0B4J269 797 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 AGPSO00116 658 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 CPSF4O95639 269 aaKnown RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 MLNP12872 115 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 ACO1P21399 889 aaKnown RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 PIK3R1P27986 724 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 VEPH1Q14D04 833 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 PTAR1Q7Z6K3 402 aaPredicted RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 ALLCQ8N6M5 410 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 ST13P5Q8NFI4 369 aaPredicted RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 OR6J1Q8NGC5 347 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 FBXO28Q9NVF7 368 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 GALNT8Q9NY28 637 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 C15orf38-AP3S2A0A0A6YYH1 394 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 PIPSLA2A3N6 862 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 PURAQ00577 322 aaKnown RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 ARPINQ7Z6K5 226 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 FAM151AQ8WW52 585 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 OTUD5Q96G74 571 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 CINPQ9BW66 212 aaPredicted RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 QTRT2Q9H974 415 aaKnown RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 BTBD3Q9Y2F9 522 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 MGRN1O60291 552 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 GLP2RO95838 553 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 RBL1P28749 1068 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 TCF7P36402 384 aaPredicted RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 GRIA3P42263 894 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 C19orf60Q96EN9 201 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 SMAD5Q99717 465 aaKnown RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 SPRTNQ9H040 489 aaPredicted RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 PTPRHQ9HD43 1115 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 EURLQ9NYK6 297 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 SLIT1O75093 1534 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 ZC3H13Q5T200 1668 aaKnown RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 RAD51BO15315 384 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 PLA2G6O60733 806 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 MZF1P28698 734 aaPredicted RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 HPCAP84074 193 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 FAM228AQ86W67 206 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 FAM126BQ8IXS8 530 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 EZH1Q92800 747 aaPredicted RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 KAT5Q92993 513 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 SLITRK1Q96PX8 696 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 HDHD2Q9H0R4 259 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 ERAP1Q9NZ08 941 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 PCDHB8Q9UN66 801 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 CEP170BQ9Y4F5 1589 aaPredicted RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 CHADO15335 359 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 SLITRK3O94933 977 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 TSHRP16473 764 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 FRMPD1Q5SYB0 1578 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 OSBPL11Q9BXB4 747 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 DPY30Q9C005 99 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 POMKQ9H5K3 350 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 RMI1Q9H9A7 625 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 FANCEQ9HB96 536 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 UMODL1Q5DID0 1318 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 SLC2A4P14672 509 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 MIPP30301 263 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 GALK1P51570 392 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 FBXW4P57775 412 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 PSME3P61289 254 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 KCTD19Q17RG1 926 aaPredicted RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 LIN52Q52LA3 116 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 ELMOD1Q8N336 334 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 TBC1D19Q8N5T2 526 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 FNDC5Q8NAU1 212 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 GSTCDQ8NEC7 633 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 MTMR9Q96QG7 549 aa19.25■□□□□ 0.67
SPAST-203ENST00000615843 ZNF70Q9UC06 446 aaPredicted RBP19.25■□□□□ 0.67
SPAST-203ENST00000615843 TRIM38O00635 465 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 PDE9AO76083 593 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 NR2C2P49116 596 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 NPY2RP49146 381 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 GPR107Q5VW38 600 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 ARMC3Q5W041 872 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 PRR5LQ6MZQ0 368 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 HS6ST3Q8IZP7 471 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 SPATA20Q8TB22 786 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 TRPC4APQ8TEL6 797 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 CLEC4MQ9H2X3 399 aaPredicted RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 SAE1Q9UBE0 346 aaPredicted RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 RGSL1A5PLK6 1076 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 SNPHO15079 494 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 C6orf222P0C671 652 aaPredicted RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 YY1P25490 414 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 GSSP48637 474 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 TYW3Q6IPR3 259 aaKnown RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 KLHL17Q6TDP4 642 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 FGD2Q7Z6J4 655 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 CLNKQ7Z7G1 428 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 ECHDC2Q86YB7 292 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 MYO1HQ8N1T3 1032 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 ACSS3Q9H6R3 686 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 ABCA9Q8IUA7 1624 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 COL3A1P02461 1466 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms