RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 RHPN2Q8IUC4 686 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 KSR1Q8IVT5 923 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 CMTR2Q8IYT2 770 aaKnown RBP3.13□□□□□ -1.91
CBWD3-209ENST00000614377 CACNA2D3Q8IZS8 1091 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 C10orf53Q8N6V4 93 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 KBTBD3Q8NAB2 608 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 MLKLQ8NB16 471 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 TMIEQ8NEW7 156 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 PTP4A1Q93096 173 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 ABTB1Q969K4 478 aaPredicted RBP3.13□□□□□ -1.91
CBWD3-209ENST00000614377 NGLY1Q96IV0 654 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 LRGUKQ96M69 825 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 RIPOR3Q96MK2 946 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 TMEM74Q96NL1 305 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 OLFM3Q96PB7 478 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 ZIC5Q96T25 663 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 RIT2Q99578 217 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 TRIM62Q9BVG3 475 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 MRPL4Q9BYD3 311 aaKnown RBP3.13□□□□□ -1.91
CBWD3-209ENST00000614377 RNF38Q9H0F5 515 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 KLHL25Q9H0H3 589 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 WNT8AQ9H1J5 351 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 ERVMER34-1Q9H9K5 563 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 KCNK13Q9HB14 408 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 TUFT1Q9NNX1 390 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 TLR7Q9NYK1 1049 aaKnown RBP3.13□□□□□ -1.91
CBWD3-209ENST00000614377 HMG20BQ9P0W2 317 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 PPT2Q9UMR5 302 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 ARHGAP26Q9UNA1 814 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 SLC12A4Q9UP95 1085 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF175Q9Y473 711 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 PCDHGA3Q9Y5H0 932 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 REREQ9P2R6 1566 aa3.13□□□□□ -1.91
CBWD3-209ENST00000614377 CLASP1Q7Z460 1538 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PI4KAP2A4QPH2 592 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 O00370 1275 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CLDN3O15551 220 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 DAPK3O43293 454 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ATG13O75143 517 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ULK1O75385 1050 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PDE5AO76074 875 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF202O95125 648 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 IL6P05231 212 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ZBTB48P10074 688 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 NR2F1P10589 423 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ATP1A3P13637 1013 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 AKAP5P24588 427 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CDH5P33151 784 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 STAT5AP42229 794 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ME1P48163 572 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 BCAP31P51572 246 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 STAT5BP51692 787 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 AFF3P51826 1226 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RAB14P61106 215 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ACTR1AP61163 376 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ARF3P61204 181 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ETF1P62495 437 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RNF4P78317 190 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LACTBP83111 547 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ARF1P84077 181 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ATP8B2P98198 1209 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 MAP3K12Q12852 859 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PLD1Q13393 1074 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SNW1Q13573 536 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TXNRD1Q16881 649 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 INAVAQ3KP66 663 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 MDH1BQ5I0G3 518 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 WDR93Q6P2C0 686 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 INTS5Q6P9B9 1019 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 NSMFQ6X4W1 530 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PATL1Q86TB9 770 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TMEM200AQ86VY9 491 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LRRC6Q86X45 466 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 STX12Q86Y82 276 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RFX6Q8HWS3 928 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SLITRK4Q8IW52 837 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 HDDC3Q8N4P3 179 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FBXL6Q8N531 539 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ANKRD44Q8N8A2 993 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CCDC63Q8NA47 563 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 C12orf50Q8NA57 414 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF473Q8WTR7 871 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TSPEARQ8WU66 669 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 USP7Q93009 1102 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FAM227BQ96M60 508 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PRICKLE1Q96MT3 831 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 DACH2Q96NX9 599 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LENG8Q96PV6 779 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 NUP85Q9BW27 656 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PACSIN1Q9BY11 444 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GPR62Q9BZJ7 368 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 IMPG2Q9BZV3 1241 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SENP6Q9GZR1 1112 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RNF41Q9H4P4 317 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 MRPL40Q9NQ50 206 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ITM2CQ9NQX7 267 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LRFN2Q9ULH4 789 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GMPPBQ9Y5P6 360 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 USP3Q9Y6I4 520 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PMF1-BGLAPU3KQ54 211 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms