RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 TNIP3Q96KP6 325 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRIM55Q9BYV6 548 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SETD4Q9NVD3 440 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GJD2Q9UKL4 321 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CIB2O75838 187 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MATKP42679 507 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NAB1Q13506 487 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C15orf59Q2T9L4 293 aaPredicted RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC25A52Q3SY17 297 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CAND1Q86VP6 1230 aaKnown RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ARID3BQ8IVW6 561 aaPredicted RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SH3TC2Q8TF17 1288 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF668Q96K58 619 aaPredicted RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TSSK1BQ9BXA7 367 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KLC2Q9H0B6 622 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ACSS2Q9NR19 701 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FZD10Q9ULW2 581 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MAGED2Q9UNF1 606 aaPredicted RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RPL26L1Q9UNX3 145 aaKnown RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LRCH1Q9Y2L9 728 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HNRNPCL1O60812 293 aaKnown RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CCDC22O60826 627 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RECQL4O94761 1208 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GNL1P36915 607 aaPredicted RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GLUD2P49448 558 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PSEN2P49810 448 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TAF6P49848 677 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SCAPQ12770 1279 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ORC1Q13415 861 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KRT81Q14533 505 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FAXCQ5TGI0 409 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ACOT1Q86TX2 421 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RSPH3Q86UC2 560 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HIC2Q96JB3 615 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PPP1R10Q96QC0 940 aaKnown RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CALN1Q9BXU9 219 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DUSP16Q9BY84 665 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 POPDC2Q9HBU9 364 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CHST12Q9NRB3 414 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GSC2O15499 205 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CSDE1O75534 798 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ATP5BP06576 529 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CNTFP26441 200 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BCAR1P56945 870 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 YWHAZP63104 245 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KIZQ2M2Z5 673 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PARP6Q2NL67 630 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C6orf163Q5TEZ5 329 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 IYDQ6PHW0 289 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CFAP36Q96G28 342 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MPP4Q96JB8 637 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NMUR2Q9GZQ4 415 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CDHR5Q9HBB8 845 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PLAC1Q9HBJ0 212 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 XAB2Q9HCS7 855 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TAS2R1Q9NYW7 299 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TTLL3Q9Y4R7 772 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TCRBV9S1A1TA0A576 114 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PPEF2O14830 753 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 WFS1O76024 890 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CYP2C9P11712 490 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FDFT1P37268 417 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF200P98182 395 aaPredicted RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HIC1Q14526 733 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PAFAH1B3Q15102 231 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BSPRYQ5W0U4 402 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PAOXQ6QHF9 649 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BEND5Q7L4P6 421 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC26A11Q86WA9 606 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KLHDC8BQ8IXV7 354 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TMEM86AQ8N2M4 240 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TMEM130Q8N3G9 435 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RNF148Q8N7C7 305 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NTAN1Q96AB6 310 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C18orf25Q96B23 403 aaPredicted RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CXCL16Q9H2A7 254 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.17□□□□□ -0.622e-7■■■□□ 18.5
SENP3-EIF4A1-201ENST00000614237 FAM159BA6NKW6 160 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C2CD2LO14523 706 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.625e-8■■■■□ 25.1
SENP3-EIF4A1-201ENST00000614237 LYNP07948 512 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ELK3P41970 407 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TMPRSS15P98073 1019 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC25A3Q00325 362 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BMPR2Q13873 1038 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PRKD1Q15139 912 aaPredicted RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PDCD2Q16342 344 aaPredicted RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CNPY1Q3B7I2 92 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 INTS6LQ5JSJ4 861 aaKnown RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RAB41Q5JT25 222 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TCHHL1Q5QJ38 904 aaPredicted RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TTC39BQ5VTQ0 682 aaPredicted RBP11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF534Q76KX8 674 aa11.17□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SATL1Q86VE3 508 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms