RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SPTBN5Q9NRC6 3674 aaKnown RBP15.19■□□□□ 0.02
CD48-203ENST00000613788 LRRD1A4D1F6 860 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 LOC730098B7Z3J9 87 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 E9PAM4 449 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 H3BRJ5 948 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 KIF2AO00139 706 aaPredicted RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 CHADO15335 359 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 DDX3YO15523 660 aaKnown RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 NFATC1O95644 943 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 CYBBP04839 570 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 SLC6A4P31645 630 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 HCAR3P49019 387 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 SEMA3BQ13214 749 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 GRM2Q14416 872 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 MPPE1Q53F39 396 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 FBXL22Q6P050 247 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 RFWD3Q6PCD5 774 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 VSIG1Q86XK7 387 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 RPRD1AQ96P16 312 aaPredicted RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 KCTD15Q96SI1 283 aaPredicted RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 FAM83CQ9BQN1 747 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 RPP25Q9BUL9 199 aaKnown RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 CALN1Q9BXU9 219 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 KCNK12Q9HB15 430 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 PCDH18Q9HCL0 1135 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 PPARGC1AQ9UBK2 798 aaKnown RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 SNX10Q9Y5X0 201 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 HELZP42694 1942 aaKnown RBP15.18■□□□□ 0.02
CD48-203ENST00000613788 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 DOCK8Q8NF50 2099 aa15.18■□□□□ 0.02
CD48-203ENST00000613788 CTAGE9A4FU28 777 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 DRGXA6NNA5 263 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 FAM72CH0Y354 149 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 EEF2KO00418 725 aaKnown RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 ENC1O14682 589 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 DAPK3O43293 454 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 TSPAN3O60637 253 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 LRIG2O94898 1065 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 GDI1P31150 447 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 GGCXP38435 758 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 MARCKSL1P49006 195 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 DNA2P51530 1060 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 ARSEP51690 589 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 TPI1P60174 286 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 COPS2P61201 443 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 NR1H3Q13133 447 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 EML3Q32P44 896 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 C5orf22Q49AR2 442 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 FAM72AQ5TYM5 149 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 TTC39BQ5VTQ0 682 aaPredicted RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 FAM72DQ6L9T8 149 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 RWDD4Q6NW29 188 aaKnown RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 C14orf80Q86SX3 495 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 FAM72BQ86X60 149 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 CCDC50Q8IVM0 306 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 RAPGEF5Q92565 580 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 ALG3Q92685 438 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 IRF7Q92985 503 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 RNF25Q96BH1 459 aaPredicted RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 TBC1D31Q96DN5 1066 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 C16orf45Q96MC5 204 aaPredicted RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 WDR24Q96S15 920 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 NAPGQ99747 312 aaPredicted RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 ZNF670Q9BS34 389 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 ZYG11BQ9C0D3 744 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 RETREG1Q9H6L5 497 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 SPHK2Q9NRA0 654 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 KLHL11Q9NVR0 708 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 DONSONQ9NYP3 566 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 DNAI1Q9UI46 699 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 IGLV3-10A0A075B6K4 115 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 ZNF487B1APH4 448 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 PI4K2BG5E9Z4 385 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 GFRA2O00451 464 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 KCNK3O14649 394 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 TRDMT1O14717 391 aaKnown RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 GOT1P17174 413 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 EPHB2P29323 1055 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 CASQ1P31415 396 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 DPYSL3Q14195 570 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 MPP7Q5T2T1 576 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 MANEALQ5VSG8 457 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 SYT10Q6XYQ8 523 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 TPGS1Q6ZTW0 290 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 RFX8Q6ZV50 586 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 ZNF683Q8IZ20 524 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 SLC44A3Q8N4M1 653 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 HJURPQ8NCD3 748 aaPredicted RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 DDI1Q8WTU0 396 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 RSAD2Q8WXG1 361 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 ASB2Q96Q27 587 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 MAK16Q9BXY0 300 aaKnown RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 CATSPERBQ9H7T0 1116 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 BRD9Q9H8M2 597 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 PRDM16Q9HAZ2 1276 aa15.17■□□□□ 0.02
CD48-203ENST00000613788 CWC15Q9P013 229 aaKnown RBP15.17■□□□□ 0.02
CD48-203ENST00000613788 C3orf70A6NLC5 250 aaPredicted RBP15.16■□□□□ 0.02
CD48-203ENST00000613788 ESPNB1AK53 854 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms