RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 MMRN1Q13201 1228 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 MTA1Q13330 715 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 DPYSL3Q14195 570 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 DPYSL2Q16555 572 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 MS4A13Q5J8X5 152 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 FAM78AQ5JUQ0 283 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
PRKN-210ENST00000612540 KAZNQ674X7 775 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 RWDD4Q6NW29 188 aaKnown RBP13.26□□□□□ -0.29
PRKN-210ENST00000612540 LRRC31Q6UY01 552 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 RFX6Q8HWS3 928 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 RNF135Q8IUD6 432 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 LGI2Q8N0V4 545 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 DOCK4Q8N1I0 1966 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 CELF5Q8N6W0 485 aaKnown RBP13.26□□□□□ -0.29
PRKN-210ENST00000612540 ST13P5Q8NFI4 369 aaPredicted RBP13.26□□□□□ -0.29
PRKN-210ENST00000612540 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.26□□□□□ -0.29
PRKN-210ENST00000612540 COG1Q8WTW3 980 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 SMARCD2Q92925 531 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 DDX50Q9BQ39 737 aaKnown RBP13.26□□□□□ -0.29
PRKN-210ENST00000612540 MYO10Q9HD67 2058 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 MYOFQ9NZM1 2061 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 OR12D3Q9UGF7 316 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 MUTYHQ9UIF7 546 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 HS3ST4Q9Y661 456 aa13.26□□□□□ -0.29
PRKN-210ENST00000612540 GOLGA6L7A0A1B0GV03 622 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 FAM72CH0Y354 149 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 TRDMT1O14717 391 aaKnown RBP13.25□□□□□ -0.29
PRKN-210ENST00000612540 ZNF185O15231 689 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 KLKB1P03952 638 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 GOT1P17174 413 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 VIPR2P41587 438 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 VCPP55072 806 aaKnown RBP13.25□□□□□ -0.29
PRKN-210ENST00000612540 DYNLT1P63172 113 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 ZXDBP98169 803 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 ZNF77Q15935 545 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 FAM72AQ5TYM5 149 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 NADSYN1Q6IA69 706 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 FAM72DQ6L9T8 149 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 RFWD3Q6PCD5 774 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 POTEHQ6S545 545 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 FAM72BQ86X60 149 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 SUSD6Q92537 303 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 TBC1D31Q96DN5 1066 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 RPRD1AQ96P16 312 aaPredicted RBP13.25□□□□□ -0.29
PRKN-210ENST00000612540 ZNF670Q9BS34 389 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 HEMGNQ9BXL5 484 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 MAK16Q9BXY0 300 aaKnown RBP13.25□□□□□ -0.29
PRKN-210ENST00000612540 OSBPL2Q9H1P3 480 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 AGO1Q9UL18 857 aaKnown RBP13.25□□□□□ -0.29
PRKN-210ENST00000612540 VANGL2Q9ULK5 521 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 ZNF510Q9Y2H8 683 aa13.25□□□□□ -0.29
PRKN-210ENST00000612540 NUP205Q92621 2012 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 E2F8A0AVK6 867 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 LOC730098B7Z3J9 87 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 E9PAM4 449 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 TSPAN3O60637 253 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 LRIG2O94898 1065 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 LATS1O95835 1130 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 KRT10P13645 584 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 EPHB2P29323 1055 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 CDKN2BP42772 138 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 ARSEP51690 589 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 ZNF135P52742 658 aaPredicted RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 COPS2P61201 443 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 AMPD2Q01433 879 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 AUHQ13825 339 aaKnown RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 FAM133BQ5BKY9 247 aaKnown RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 TFDP3Q5H9I0 405 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 ADGRF1Q5T601 910 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 Q6ZNB5 142 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 RFX8Q6ZV50 586 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 HTR3DQ70Z44 454 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 OTOP3Q7RTS5 596 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 ADAT2Q7Z6V5 191 aaKnown RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 C14orf80Q86SX3 495 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 ALYREFQ86V81 257 aaKnown RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 BBS7Q8IWZ6 715 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 TDRD5Q8NAT2 981 aaKnown RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 RIN3Q8TB24 985 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 KXD1Q9BQD3 176 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 OSBPL8Q9BZF1 889 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 ZFP14Q9HCL3 533 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 SMARCAL1Q9NZC9 954 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 STIM2Q9P246 746 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 RCOR3Q9P2K3 495 aaPredicted RBP13.24□□□□□ -0.29
PRKN-210ENST00000612540 WNT6Q9Y6F9 365 aa13.24□□□□□ -0.29
PRKN-210ENST00000612540 hCG_1818297A0A087WSY0 165 aa13.23□□□□□ -0.29
PRKN-210ENST00000612540 TYW5A2RUC4 315 aaKnown RBP13.23□□□□□ -0.29
PRKN-210ENST00000612540 C3orf70A6NLC5 250 aaPredicted RBP13.23□□□□□ -0.29
PRKN-210ENST00000612540 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
PRKN-210ENST00000612540 PGRMC1O00264 195 aaKnown RBP13.23□□□□□ -0.29
PRKN-210ENST00000612540 CES2O00748 559 aa13.23□□□□□ -0.29
PRKN-210ENST00000612540 APOL1O14791 398 aa13.23□□□□□ -0.29
PRKN-210ENST00000612540 FGGP02679 453 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms