RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ZNF212Q9UDV6 495 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 BCLAF3A2AJT9 711 aaKnown RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 FAM159BA6NKW6 160 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 RALBP11234 206 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 FGF3P11487 239 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 IGFBP6P24592 240 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SULT1E1P49888 294 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 PDPK2PQ6A1A2 396 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 FRMD7Q6ZUT3 714 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 CXorf38Q8TB03 319 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 USP33Q8TEY7 942 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 USP13Q92995 863 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 MFSD3Q96ES6 412 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 ERAP1Q9NZ08 941 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 IGKV6-21A0A0C4DH24 114 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 CCDC160A6NGH7 325 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SDR42E2A6NKP2 422 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 TRDMT1O14717 391 aaKnown RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 LIN7AO14910 233 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 PLIN3O60664 434 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SERPINA6P08185 405 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 ACAP1Q15027 740 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SFT2D3Q587I9 215 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 EFHC1Q5JVL4 640 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 MBLAC2Q68D91 279 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SLC9A4Q6AI14 798 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF781Q8N8C0 355 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SGF29Q96ES7 293 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 GCNAQ96QF7 691 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 NXF3Q9H4D5 531 aaKnown RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SETD4Q9NVD3 440 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 INPP5FQ9Y2H2 1132 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 SNX10Q9Y5X0 201 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 PGM3O95394 542 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 ADCYAP1R1P41586 468 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 AQP4P55087 323 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 PKNOX1P55347 436 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 ADIGQ0VDE8 80 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 PCLAFQ15004 111 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 TRMT5Q32P41 509 aaKnown RBP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 DNAL1Q4LDG9 190 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 PPM1LQ5SGD2 360 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 NCBP2-AS2Q69YL0 99 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL6A1-207ENST00000612273 OSMRQ99650 979 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 CYP3A43Q9HB55 503 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 CDHR5Q9HBB8 845 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 MTMR10Q9NXD2 777 aa14.44□□□□□ -0.1
COL6A1-207ENST00000612273 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-207ENST00000612273 MYOCOSA0A1B0GUC4 107 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 MAGEA13PA6NCF6 341 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 LGALS2P05162 132 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 CHRNGP07510 517 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 EDNRBP24530 442 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 IDH3AP50213 366 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 RNF111Q6ZNA4 994 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 CATSPER4Q7RTX7 472 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 PTAR1Q7Z6K3 402 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-207ENST00000612273 STRA8Q7Z7C7 330 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 SNX31Q8N9S9 440 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF180Q9UJW8 692 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 ADAMTS6Q9UKP5 1117 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 PHGDHO43175 533 aaKnown RBP14.43□□□□□ -0.1
COL6A1-207ENST00000612273 GSRP00390 522 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 RAG1P15918 1043 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 EPHA3P29320 983 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 IFRD2Q12894 506 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-207ENST00000612273 DLG1Q12959 904 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 SLC9B1Q4ZJI4 515 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 CERCAMQ5T4B2 595 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 TMEM198Q66K66 360 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 SDCCAG8Q86SQ7 713 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-207ENST00000612273 DCLK2Q8N568 766 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 MAPK15Q8TD08 544 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 SLC35F5Q8WV83 523 aa14.43□□□□□ -0.1
COL6A1-207ENST00000612273 TIMM13Q9Y5L4 95 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF646O15015 1829 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-207ENST00000612273 M0QYT0 321 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 KLF11O14901 512 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 MAGEC1O60732 1142 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 SNNO75324 88 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 LTFP02788 710 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 CPA3P15088 417 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 RPS12P25398 132 aaKnown RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 AP1ARQ63HQ0 302 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 NET1Q7Z628 596 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 APOBEC3FQ8IUX4 373 aaKnown RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 FCRL3Q96P31 734 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 OR52B2Q96RD2 323 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF670Q9BS34 389 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 ARID2Q68CP9 1835 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 TSPAN1O60635 241 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 MCF2P10911 925 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 NUDT2P50583 147 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 RAP1GDS1P52306 607 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 TBL3Q12788 808 aaKnown RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 TTLL4Q14679 1199 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 SYPL2Q5VXT5 272 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 NAPRTQ6XQN6 538 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 FAM156AQ8NDB6 213 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms