RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 A0A1W2PQ64 194 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 TYW5A2RUC4 315 aaKnown RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 SLC16A3O15427 465 aaKnown RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 MOCS2O96007 188 aaPredicted RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 DLDP09622 509 aaKnown RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 SLC11A2P49281 568 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 PMS1P54277 932 aaKnown RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 TBX4P57082 545 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 ST8SIA6P61647 398 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 RPS14P62263 151 aaKnown RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 PTPRNQ16849 979 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 ZNF776Q68DI1 518 aaPredicted RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 CCNI2Q6ZMN8 369 aaPredicted RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 ADIPOR2Q86V24 386 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 PPM1KQ8N3J5 372 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 CARNMT1Q8N4J0 409 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 TFAP2BQ92481 460 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 TMEM245Q9H330 911 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 CNGB3Q9NQW8 809 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 ANKRD6Q9Y2G4 727 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 RAXQ9Y2V3 346 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 CEP83Q9Y592 693 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 URB1O60287 2271 aaKnown RBP13.89□□□□□ -0.19
HMGB1P24-201ENST00000611897 FAM149AA5PLN7 773 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 FAM221BA6H8Z2 402 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 LTFP02788 710 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 ZNF883P0CG24 379 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 TBXAS1P24557 533 aaPredicted RBP13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 SLC6A4P31645 630 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 CCT8P50990 548 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 FKBP3Q00688 224 aaKnown RBP13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 CDH18Q13634 790 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 SUZ12Q15022 739 aaKnown RBP13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 COL28A1Q2UY09 1125 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 CCDC40Q4G0X9 1142 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 NUGGCQ68CJ6 796 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 ANKRD40Q6AI12 368 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 ISM2Q6H9L7 571 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 GLRX5Q86SX6 157 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 CCDC117Q8IWD4 279 aaPredicted RBP13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 DHX40Q8IX18 779 aaKnown RBP13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 C1orf216Q8TAB5 229 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 ADAM32Q8TC27 787 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 HNRNPLLQ8WVV9 542 aaKnown RBP13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 KAT5Q92993 513 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 FAM149B1Q96BN6 582 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 NT5C1BQ96P26 610 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 CDC6Q99741 560 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 PCED1AQ9H1Q7 454 aa13.88□□□□□ -0.19
HMGB1P24-201ENST00000611897 CELSR3Q9NYQ7 3312 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 NYNRINQ9P2P1 1898 aaKnown RBP13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 GOLGA6L4A6NEF3 574 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 H0Y8X5 98 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 ACSL4O60488 711 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 LATS1O95835 1130 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 CSKP41240 450 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 GRIA4P48058 902 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 C21orf59P57076 290 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 RPS24P62847 133 aaKnown RBP13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 PRAMEF14Q5SWL7 426 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 PMF1Q6P1K2 205 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 MSANTD2Q6P1R3 559 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 MMS22LQ6ZRQ5 1243 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 UNC45BQ8IWX7 931 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 CFAP52Q8N1V2 620 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 HJURPQ8NCD3 748 aaPredicted RBP13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 KCTD13Q8WZ19 329 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 SMARCE1Q969G3 411 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 SLC35C1Q96A29 364 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 PRICKLE1Q96MT3 831 aaPredicted RBP13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 SLC6A18Q96N87 628 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 FBRSQ9HAH7 460 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 ST7Q9NRC1 585 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 TOR4AQ9NXH8 423 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 FBXL12Q9NXK8 326 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 SERGEFQ9UGK8 458 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 NCKAP1Q9Y2A7 1128 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 COQ4Q9Y3A0 265 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
HMGB1P24-201ENST00000611897 KNTC1P50748 2209 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 A0A1W2PP55 124 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 RNASEH1O60930 286 aaKnown RBP13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 SIN3BO75182 1162 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 RNASEH2AO75792 299 aaKnown RBP13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 SMC2O95347 1197 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 CD27P26842 260 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 GRK6P43250 576 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 PSMD8P48556 350 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 FMO5P49326 533 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 ACAP1Q15027 740 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 KCNT1Q5JUK3 1230 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 KIAA0895LQ68EN5 471 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
HMGB1P24-201ENST00000611897 LCLAT1Q6UWP7 414 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms