RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 TRIM49P0CI25 452 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 TRIM49CP0CI26 452 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 GDI1P31150 447 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 AVPR1AP37288 418 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 GRIK1P39086 918 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 COPB1P53618 953 aaKnown RBP7.45□□□□□ -1.22
CBWD1-219ENST00000611457 COPAP53621 1224 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 HSP90B2PQ58FF3 399 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 PIK3R6Q5UE93 754 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 GRAMD4Q6IC98 578 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 MMS22LQ6ZRQ5 1243 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 KANSL1Q7Z3B3 1105 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 KXD1Q9BQD3 176 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 RPP25Q9BUL9 199 aaKnown RBP7.45□□□□□ -1.22
CBWD1-219ENST00000611457 TMEM248Q9NWD8 314 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 DONSONQ9NYP3 566 aa7.45□□□□□ -1.22
CBWD1-219ENST00000611457 AGO1Q9UL18 857 aaKnown RBP7.45□□□□□ -1.22
CBWD1-219ENST00000611457 TRIM49BA6NDI0 452 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 PHACTR2O75167 634 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 SEC31AO94979 1220 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 MYL4P12829 197 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 GBP1P32455 592 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ETFBP38117 255 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CDH4P55283 916 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 FMO1Q01740 532 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CEBPZQ03701 1054 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 KRT31Q15323 416 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 DPCR1Q3MIW9 517 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 E4F1Q66K89 784 aaPredicted RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ACOT1Q86TX2 421 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 REXO1L1PQ8IX06 675 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ANKRD20A12PQ8NF67 263 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ERCC4Q92889 916 aaPredicted RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 RPGRIP1Q96KN7 1286 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 TBCBQ99426 244 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ACBD3Q9H3P7 528 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 BRD9Q9H8M2 597 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CAPN10Q9HC96 672 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 VPS45Q9NRW7 570 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 KCTD5Q9NXV2 234 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CAPN11Q9UMQ6 739 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CPQQ9Y646 472 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 A0A1W2PQH9 124 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CBFA2T2O43439 604 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 LATO43561 262 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 TLR5O60602 858 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ERLIN1O75477 346 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 LMNAP02545 664 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CYP1A2P05177 515 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 DLATP10515 647 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CYP11B1P15538 503 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 GALK1P51570 392 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 TUBB2AQ13885 445 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 GRM3Q14832 879 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ADIPOR2Q86V24 386 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 PACS2Q86VP3 889 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 YAF2Q8IY57 180 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CBARPQ8N350 705 aaPredicted RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 DENND6BQ8NEG7 585 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 SEPT5Q99719 369 aaPredicted RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 TUBB2BQ9BVA1 445 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CARD6Q9BX69 1037 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CXorf56Q9H5V9 222 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 HESX1Q9UBX0 185 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 SUN2Q9UH99 717 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 SSUH2Q9Y2M2 353 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 THADAQ6YHU6 1953 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ILVBLA1L0T0 632 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CCDC151A5D8V7 595 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 MDM4O15151 490 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 DTNBO60941 627 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ADAM23O75077 832 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CCDC130P13994 396 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 HDCP19113 662 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CALRP27797 417 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ARHGAP25P42331 645 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CXCL12P48061 93 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 HARS2P49590 506 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CORO7P57737 925 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CYP4F8P98187 520 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 BRD3Q15059 726 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 SKIV2LQ15477 1246 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 PTPRNQ16849 979 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 LRRC38Q5VT99 294 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 NADSYN1Q6IA69 706 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ANKS1BQ7Z6G8 1248 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 GLYCTKQ8IVS8 523 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 OXR1Q8N573 874 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ATP6V0D2Q8N8Y2 350 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 FRS2Q8WU20 508 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 RABGGTAQ92696 567 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 INSM2Q96T92 566 aaPredicted RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CPEB1Q9BZB8 566 aaKnown RBP7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ZDHHC4Q9NPG8 344 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 CCL26Q9Y258 94 aa7.44□□□□□ -1.22
CBWD1-219ENST00000611457 ZSCAN5CA6NGD5 496 aaPredicted RBP7.43□□□□□ -1.22
CBWD1-219ENST00000611457 C2CD4BA6NLJ0 364 aa7.43□□□□□ -1.22
CBWD1-219ENST00000611457 C2CD2LO14523 706 aa7.43□□□□□ -1.22
CBWD1-219ENST00000611457 FGF10O15520 208 aaPredicted RBP7.43□□□□□ -1.22
CBWD1-219ENST00000611457 CYP26A1O43174 497 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms