RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 NCAM2O15394 837 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 HOXC13P31276 330 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 CA8P35219 290 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 SERPINB6P35237 376 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 TWF1Q12792 350 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 RWDD4Q6NW29 188 aaKnown RBP22.24■■□□□ 1.15
USP6NL-204ENST00000606752 LRIG3Q6UXM1 1119 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 TMC7Q7Z402 723 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 HOOK3Q86VS8 718 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 ATP6V0D2Q8N8Y2 350 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 HTR3CQ8WXA8 447 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 LGMNQ99538 433 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 FERMT1Q9BQL6 677 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 PRDM12Q9H4Q4 367 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 NEU3Q9UQ49 428 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 INSL5Q9Y5Q6 135 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 HS3ST4Q9Y661 456 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 C5orf60A6NFR6 353 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 H3BQF6 201 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 OPA1O60313 960 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 GCATO75600 419 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 SYF2O95926 243 aaKnown RBP22.24■■□□□ 1.15
USP6NL-204ENST00000606752 IGLV3-27P01718 113 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 ATP5C1P36542 298 aaKnown RBP22.24■■□□□ 1.15
USP6NL-204ENST00000606752 EPHB3P54753 998 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 RING1Q06587 406 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 PRKD1Q15139 912 aaPredicted RBP22.24■■□□□ 1.15
USP6NL-204ENST00000606752 TRMT10CQ7L0Y3 403 aaKnown RBP22.24■■□□□ 1.15
USP6NL-204ENST00000606752 NAT8LQ8N9F0 302 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 PRCCQ92733 491 aaPredicted RBP22.24■■□□□ 1.15
USP6NL-204ENST00000606752 TBC1D31Q96DN5 1066 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 PWWP2AQ96N64 755 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 TRPM5Q9NZQ8 1165 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 DNMT3LQ9UJW3 386 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 LZTS1Q9Y250 596 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 KIAA1671Q9BY89 1806 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 H0YGN5 161 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 FGF10O15520 208 aaPredicted RBP22.23■■□□□ 1.15
USP6NL-204ENST00000606752 RRP9O43818 475 aaKnown RBP22.23■■□□□ 1.15
USP6NL-204ENST00000606752 ZNF189O75820 626 aaPredicted RBP22.23■■□□□ 1.15
USP6NL-204ENST00000606752 HECTD3Q5T447 861 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 KLHDC10Q6PID8 442 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 DNAJB7Q7Z6W7 309 aaPredicted RBP22.23■■□□□ 1.15
USP6NL-204ENST00000606752 RELL1Q8IUW5 271 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 CCNYQ8ND76 341 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 BTN2A3PQ96KV6 586 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 BRD8Q9H0E9 1235 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 EPB41L4BQ9H329 900 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 CATSPERBQ9H7T0 1116 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 NFS1Q9Y697 457 aa22.23■■□□□ 1.15
USP6NL-204ENST00000606752 MX2P20592 715 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 CTNNB1P35222 781 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 PPP3CCP48454 512 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 TUBP50607 506 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 BASP1P80723 227 aaKnown RBP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 AP1B1Q10567 949 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 MTA1Q13330 715 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 ARTNQ5T4W7 220 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 ACBD5Q5T8D3 534 aaPredicted RBP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 PIK3R6Q5UE93 754 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 NPWQ8N729 165 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 NETO2Q8NC67 525 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 SH3GL2Q99962 352 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 HBS1LQ9Y450 684 aaKnown RBP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 E9PAM4 449 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 TGM5O43548 720 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 VAV1P15498 845 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 TP53INP2Q8IXH6 220 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 TAB3Q8N5C8 712 aaPredicted RBP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 CCDC110Q8TBZ0 833 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 PSMG2Q969U7 264 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 RBM15Q96T37 977 aaKnown RBP eCLIP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 RAB6BQ9NRW1 208 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 DNAJC17Q9NVM6 304 aaKnown RBP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 UXTQ9UBK9 157 aaPredicted RBP22.22■■□□□ 1.15
USP6NL-204ENST00000606752 RWDD3Q9Y3V2 267 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 IRAK3Q9Y616 596 aa22.22■■□□□ 1.15
USP6NL-204ENST00000606752 RIPK2O43353 540 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 ADH1AP07327 375 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 HMBSP08397 361 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 OAS2P29728 719 aaKnown RBP22.21■■□□□ 1.15
USP6NL-204ENST00000606752 PLD1Q13393 1074 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 MS4A13Q5J8X5 152 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 ANKRD22Q5VYY1 191 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 DENND2CQ68D51 928 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 LILRA6Q6PI73 481 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 C14orf80Q86SX3 495 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 ITIH5Q86UX2 942 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 LZTR1Q8N653 840 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 GOLGA6L1Q8N7Z2 621 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 P2RY11Q96G91 374 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 KLHL5Q96PQ7 755 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 TCF25Q9BQ70 676 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 NACA2Q9H009 215 aa22.21■■□□□ 1.15
USP6NL-204ENST00000606752 CDC42EP4Q9H3Q1 356 aaKnown RBP22.21■■□□□ 1.15
USP6NL-204ENST00000606752 ALG13Q9NP73 1137 aaKnown RBP22.21■■□□□ 1.15
USP6NL-204ENST00000606752 STK10O94804 968 aaKnown RBP22.2■■□□□ 1.14
USP6NL-204ENST00000606752 NUDT17P0C025 328 aa22.2■■□□□ 1.14
USP6NL-204ENST00000606752 SPATA31D3P0C874 917 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms