RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SH3BP5O60239 455 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 LETM1O95202 739 aaPredicted RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 FGFR1OPO95684 399 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 POLR2EP19388 210 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 CD70P32970 193 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 ACSL1P33121 698 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 RPS14P62263 151 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 RPS24P62847 133 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 SIM1P81133 766 aaPredicted RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 GRIK2Q13002 908 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 NNTQ13423 1086 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 HNRNPDQ14103 355 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 MS4A13Q5J8X5 152 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 SYPL2Q5VXT5 272 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 UNQ6494/PRO21346Q6UXR6 183 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 BEND5Q7L4P6 421 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 TMEM110Q86TL2 294 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 CACUL1Q86Y37 369 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 MFN1Q8IWA4 741 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 DQX1Q8TE96 717 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 TTC17Q96AE7 1141 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 FAM149B1Q96BN6 582 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 PRICKLE1Q96MT3 831 aaPredicted RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 MED15Q96RN5 788 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 TMEM121BQ9BXQ6 578 aaPredicted RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 ADAM33Q9BZ11 813 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 MIR1-1HGQ9H1L0 117 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 PCED1AQ9H1Q7 454 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 LHX5Q9H2C1 402 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 ACP6Q9NPH0 428 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 ST7Q9NRC1 585 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 KIAA1468Q9P260 1216 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 SUN2Q9UH99 717 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 EIF2B4Q9UI10 523 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 CYTH4Q9UIA0 394 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 XPO7Q9UIA9 1087 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 INTS6Q9UL03 887 aaKnown RBP7.91□□□□□ -1.14
CUX1-219ENST00000606749 CKAP5Q14008 2032 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 BECN2A8MW95 431 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 E5RJQ4 531 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 CAPN9O14815 690 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 PAPSS1O43252 624 aaPredicted RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 SART1O43290 800 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 HYAL3O43820 417 aaPredicted RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 SLC9A1P19634 815 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 RDXP35241 583 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 CSNK1EP49674 416 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 YWHAZP63104 245 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 BNC1Q01954 994 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 ZBTB16Q05516 673 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 EIF4EBP2Q13542 120 aaPredicted RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 TRIP6Q15654 476 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 CAMK4Q16566 473 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 MEA1Q16626 185 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 ZC3H12AQ5D1E8 599 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 FSCBQ5H9T9 825 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 GJB7Q6PEY0 223 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 TRIM65Q6PJ69 517 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 ENOSF1Q7L5Y1 443 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 TAC4Q86UU9 113 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 IRF2BP1Q8IU81 584 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 CREBRFQ8IUR6 639 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 CFAP52Q8N1V2 620 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 CARNMT1Q8N4J0 409 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 ZCCHC9Q8N567 271 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 WDTC1Q8N5D0 677 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 ZNF557Q8N988 423 aaPredicted RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 HJURPQ8NCD3 748 aaPredicted RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 ADAM32Q8TC27 787 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 GATA6Q92908 595 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 MYO19Q96H55 970 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 SERPINB11Q96P15 392 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 CRACR2AQ9BSW2 395 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 TRIM62Q9BVG3 475 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 NUCKS1Q9H1E3 243 aaKnown RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 RSPH9Q9H1X1 276 aaPredicted RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 MTG2Q9H4K7 406 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 THAP9Q9H5L6 903 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 C6orf106Q9H6K1 298 aaPredicted RBP7.9□□□□□ -1.14
CUX1-219ENST00000606749 GAREM1Q9H706 876 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 FBRSQ9HAH7 460 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 IL21RQ9HBE5 538 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 POPDC2Q9HBU9 364 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 RWDD2AQ9UIY3 292 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 ZMIZ1Q9ULJ6 1067 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 NEUROG3Q9Y4Z2 214 aa7.9□□□□□ -1.14
CUX1-219ENST00000606749 KMT2BQ9UMN6 2715 aaPredicted RBP7.9□□□□□ -1.15
CUX1-219ENST00000606749 CACNA1BQ00975 2339 aa7.9□□□□□ -1.15
CUX1-219ENST00000606749 CFAP47Q6ZTR5 3102 aa7.89□□□□□ -1.15
CUX1-219ENST00000606749 A0A1B0GVT2 93 aa7.89□□□□□ -1.15
CUX1-219ENST00000606749 TYW5A2RUC4 315 aaKnown RBP7.89□□□□□ -1.15
CUX1-219ENST00000606749 FAM221BA6H8Z2 402 aa7.89□□□□□ -1.15
CUX1-219ENST00000606749 H0Y626 953 aa7.89□□□□□ -1.15
CUX1-219ENST00000606749 THAP12O43422 761 aa7.89□□□□□ -1.15
CUX1-219ENST00000606749 CBFA2T3O75081 653 aa7.89□□□□□ -1.15
CUX1-219ENST00000606749 LUC7L3O95232 432 aaKnown RBP7.89□□□□□ -1.15
CUX1-219ENST00000606749 TRIM16O95361 564 aa7.89□□□□□ -1.15
CUX1-219ENST00000606749 SEMA4FO95754 770 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms