RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 KTN1Q86UP2 1357 aaKnown RBP4.22□□□□□ -1.73
IGHV3-29-201ENST00000604817 PDE4DIPQ5VU43 2346 aa4.22□□□□□ -1.73
IGHV3-29-201ENST00000604817 TNRC6CQ9HCJ0 1690 aaKnown RBP4.22□□□□□ -1.73
IGHV3-29-201ENST00000604817 LTN1O94822 1766 aa4.22□□□□□ -1.73
IGHV3-29-201ENST00000604817 BRCA1P38398 1863 aaKnown RBP4.22□□□□□ -1.73
IGHV3-29-201ENST00000604817 KDM3AQ9Y4C1 1321 aa4.21□□□□□ -1.73
IGHV3-29-201ENST00000604817 KIAA1210Q9ULL0 1709 aa4.21□□□□□ -1.73
IGHV3-29-201ENST00000604817 NPIPB15A6NHN6 443 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 H7C4K7 107 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 GRM6O15303 877 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ADAM20O43506 726 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 COQ9O75208 318 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 KLHL18O94889 574 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 MT-ND3P03897 115 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 GJB1P08034 283 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ALADP13716 330 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 IFNAR1P17181 557 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ATF7P17544 494 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 RPL13P26373 211 aaKnown RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 SERPINA4P29622 427 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ATP5DP30049 168 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 SLC5A2P31639 672 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 AKT1P31749 480 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 CRHR1P34998 444 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 PAFAH1B1P43034 410 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ETV4P43268 484 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 MCM2P49736 904 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 CDK7P50613 346 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 PDE6CP51160 858 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 RBM5P52756 815 aaKnown RBP eCLIP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 LBX1P52954 281 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 PSMC6P62333 389 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 DLX2Q07687 328 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 TFCP2Q12800 502 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 PTP4A2Q12974 167 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ATP1A4Q13733 1029 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 EIF4HQ15056 248 aaKnown RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 KYNUQ16719 465 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 GALNTL6Q49A17 601 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 TTC31Q49AM3 519 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 PRR31Q5SQ13 230 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 LRCH2Q5VUJ6 765 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 CASC1Q6TDU7 716 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 IKBIPQ70UQ0 350 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 SDCCAG8Q86SQ7 713 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ERC1Q8IUD2 1116 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 TAGAPQ8N103 731 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 SCML4Q8N228 414 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 NFKBIDQ8NI38 313 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 NKD2Q969F2 451 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ZNF845Q96IR2 970 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ZSWIM3Q96MP5 696 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 PI4K2AQ9BTU6 479 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 BRD8Q9H0E9 1235 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 C11orf54Q9H0W9 315 aaPredicted RBP4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 SLC25A18Q9H1K4 315 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 NDST4Q9H3R1 872 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 FSCN3Q9NQT6 498 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 TLR9Q9NR96 1032 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 HCFC1R1Q9NWW0 138 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 GPRC5DQ9NZD1 345 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 NDUFAF4Q9P032 175 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 C5AR2Q9P296 337 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 XPR1Q9UBH6 696 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 CROTQ9UKG9 612 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 AGAP1Q9UPQ3 857 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 CNTN6Q9UQ52 1028 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 LYVE1Q9Y5Y7 322 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 DUSP10Q9Y6W6 482 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 ATRNL1Q5VV63 1379 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 PALLDQ8WX93 1383 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 QRICH2Q9H0J4 1663 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 C4BP0C0L5 1744 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 DOT1LQ8TEK3 1739 aa4.21□□□□□ -1.74
IGHV3-29-201ENST00000604817 LOC102723971A0A1B0GUV8 181 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 SAC3D1A6NKF1 404 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 EFCAB8A8MWE9 144 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 TGFB1I1O43294 461 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 CCP110O43303 1012 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 SLC43A1O75387 559 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 PLATP00750 562 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 HMGCRP04035 888 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 GNAI3P08754 354 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 SRGAP2BP0DMP2 458 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 ARP10275 920 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 CPA1P15085 419 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 STMN1P16949 149 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 ZNF28P17035 718 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 TPH1P17752 444 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 FGFR4P22455 802 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 ATP5F1P24539 256 aaPredicted RBP4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 TBXAS1P24557 533 aaPredicted RBP4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 KIF5BP33176 963 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 PSMB10P40306 273 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 EIF2DP41214 584 aaKnown RBP4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 GARSP41250 739 aaKnown RBP4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 CD86P42081 329 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 MSH2P43246 934 aa4.2□□□□□ -1.74
IGHV3-29-201ENST00000604817 AMPHP49418 695 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms