RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CACTIN-AS1Q8N1I8 211 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 OR2T34Q8NGX1 318 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TTC9Q92623 222 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PLD4Q96BZ4 506 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SERAC1Q96JX3 654 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ZNF578Q96N58 590 aaPredicted RBP12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TNMDQ9H2S6 317 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 USP3Q9Y6I4 520 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 COL6A6A6NMZ7 2263 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 UBE4BO95155 1302 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TLR4O00206 839 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MID1O15344 667 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 KLK10O43240 276 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 RNASEH1O60930 286 aaKnown RBP12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ATP5BP06576 529 aaKnown RBP12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 GABREP78334 506 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DLG4P78352 724 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CLDN10P78369 228 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 EHHADHQ08426 723 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 INCA1Q0VD86 236 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TRIP4Q15650 581 aaPredicted RBP12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CST6Q15828 149 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SLC45A4Q5BKX6 768 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 KANSL1Q7Z3B3 1105 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 LURAP1LQ8IV03 231 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ARHGAP18Q8N392 663 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PARD3BQ8TEW8 1205 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 KCNE4Q8WWG9 221 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TAF4BQ92750 862 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NT5C1AQ9BXI3 368 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NEUROG2Q9H2A3 272 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TFIP11Q9UBB9 837 aaKnown RBP12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SUN2Q9UH99 717 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SCML1Q9UN30 329 aa12.27□□□□□ -0.45
PDLIM1P1-201ENST00000604187 COL5A1P20908 1838 aaPredicted RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TRIM38O00635 465 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SDC3O75056 442 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SIN3BO75182 1162 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CD2BP2O95400 341 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ASS1P00966 412 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 RPN1P04843 607 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CD58P19256 250 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 POLR2EP19388 210 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ACP1P24666 158 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CD70P32970 193 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PIK3CAP42336 1068 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 RXRGP48443 463 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HARS2P49590 506 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CCR5P51681 352 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SGSHP51688 502 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 VAC14Q08AM6 782 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 RABEP1Q15276 862 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ZACNQ401N2 412 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 FAM173BQ6P4H8 233 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PRICKLE2Q7Z3G6 844 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 KIAA0907Q7Z7F0 614 aaPredicted RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SPATS2Q86XZ4 545 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MMAAQ8IVH4 418 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 OXR1Q8N573 874 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 WFDC5Q8TCV5 224 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TMA16Q96EY4 203 aaKnown RBP12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MED8Q96G25 268 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 OMDQ99983 421 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DUSP16Q9BY84 665 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ERVMER34-1Q9H9K5 563 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 KBTBD4Q9NVX7 518 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 FZD4Q9ULV1 537 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NUMA1Q14980 2115 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 COL12A1Q99715 3063 aa12.26□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SIGLEC6O43699 453 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PSMD8P48556 350 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ZNF445P59923 1031 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ST8SIA6P61647 398 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PPP2CBP62714 309 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PPP2CAP67775 309 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DAB2P98082 770 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 E2F1Q01094 437 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SFSWAPQ12872 951 aaKnown RBP12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 E2F4Q16254 413 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HNRNPA1L2Q32P51 320 aaKnown RBP12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PPP1R26Q5T8A7 1209 aaPredicted RBP12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NAPEPLDQ6IQ20 393 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SV2AQ7L0J3 742 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TRIM4Q9C037 500 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CGNQ9P2M7 1197 aaKnown RBP12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 STOML2Q9UJZ1 356 aa12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.25□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MYO9AB2RTY4 2548 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 C10orf142B7Z368 130 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 USP12O75317 370 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DXOO77932 396 aaKnown RBP12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HLA-DRAP01903 254 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SLC8A1P32418 973 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CSRP3P50461 194 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms