RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RRAGAQ7L523 313 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 PNPLA1Q8N8W4 532 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 C1orf216Q8TAB5 229 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 LMO3Q8TAP4 145 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 HSFY1Q96LI6 401 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 PCED1AQ9H1Q7 454 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 PRSS16Q9NQE7 514 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 STIM2Q9P246 746 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 SLCO1B1Q9Y6L6 691 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 A0A1B0GVT2 93 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 FAM221BA6H8Z2 402 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 P4HA2O15460 535 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 FBXO21O94952 628 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 DNTTP04053 509 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 FTH1P19P0C7X4 201 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 C7P10643 843 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 PPP1R2P41236 205 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 CSNK1EP49674 416 aaKnown RBP13.67□□□□□ -0.22
RPS28-204ENST00000602140 NADSYN1Q6IA69 706 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 IL27RAQ6UWB1 636 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 MFN1Q8IWA4 741 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 SCUBE3Q8IX30 993 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 ADAMTS14Q8WXS8 1223 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 AZIN2Q96A70 460 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 IRX2Q9BZI1 471 aaPredicted RBP13.67□□□□□ -0.22
RPS28-204ENST00000602140 BTBD1Q9H0C5 482 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 MTG2Q9H4K7 406 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 FBRSQ9HAH7 460 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 TM7SF3Q9NS93 570 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 SUN2Q9UH99 717 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 PCOLCE2Q9UKZ9 415 aa13.67□□□□□ -0.22
RPS28-204ENST00000602140 FNDC3AQ9Y2H6 1198 aaKnown RBP13.67□□□□□ -0.22
RPS28-204ENST00000602140 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.67□□□□□ -0.22
RPS28-204ENST00000602140 DMXL2Q8TDJ6 3036 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 PPP1R3GB7ZBB8 358 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 SEMA4FO95754 770 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 FYNP06241 537 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 ZNF883P0CG24 379 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 BMP6P22004 513 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 AFF3P51826 1226 aaKnown RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 RPS24P62847 133 aaKnown RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 NUCB2P80303 420 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 GCNT1Q02742 428 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 ZBTB16Q05516 673 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 TTC31Q49AM3 519 aaPredicted RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 CARNMT1Q8N4J0 409 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 ZNF557Q8N988 423 aaPredicted RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 HJURPQ8NCD3 748 aaPredicted RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 EHBP1Q8NDI1 1231 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 FIBINQ8TAL6 211 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 ADAM32Q8TC27 787 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 DQX1Q8TE96 717 aaKnown RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 NELFBQ8WX92 580 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 FAM149B1Q96BN6 582 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 MYEOVQ96EZ4 313 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 LMLNQ96KR4 655 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 FCRL2Q96LA5 508 aaPredicted RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 PRICKLE1Q96MT3 831 aaPredicted RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 SERPINB11Q96P15 392 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 ST7Q9NRC1 585 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 NAALADL1Q9UQQ1 740 aa13.66□□□□□ -0.22
RPS28-204ENST00000602140 APOBEC2Q9Y235 224 aaKnown RBP13.66□□□□□ -0.22
RPS28-204ENST00000602140 FREM2Q5SZK8 3169 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 BICDL2A1A5D9 508 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 TYW5A2RUC4 315 aaKnown RBP13.65□□□□□ -0.22
RPS28-204ENST00000602140 FSBPO95073 299 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.22
RPS28-204ENST00000602140 KRT5P13647 590 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 CSKP41240 450 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 GPD2P43304 727 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 ST8SIA6P61647 398 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 KCNH2Q12809 1159 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 TEAD4Q15561 434 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 KIF19Q2TAC6 998 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 ZNF776Q68DI1 518 aaPredicted RBP13.65□□□□□ -0.22
RPS28-204ENST00000602140 GLRX5Q86SX6 157 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 SLCO6A1Q86UG4 719 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 TRIM59Q8IWR1 403 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
RPS28-204ENST00000602140 CFAP52Q8N1V2 620 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 RHBDD1Q8TEB9 315 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 TTC17Q96AE7 1141 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 BIRC7Q96CA5 298 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 MYO19Q96H55 970 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 SLC39A13Q96H72 371 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 KREMEN1Q96MU8 473 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 DDX50Q9BQ39 737 aaKnown RBP13.65□□□□□ -0.22
RPS28-204ENST00000602140 NUCKS1Q9H1E3 243 aaKnown RBP13.65□□□□□ -0.22
RPS28-204ENST00000602140 TM9SF3Q9HD45 589 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 INTS6Q9UL03 887 aaKnown RBP13.65□□□□□ -0.22
RPS28-204ENST00000602140 CTNND2Q9UQB3 1225 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 TLR6Q9Y2C9 796 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 ANKRD6Q9Y2G4 727 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 SNX11Q9Y5W9 270 aa13.65□□□□□ -0.22
RPS28-204ENST00000602140 BIN1O00499 593 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms