RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	GOLGA1	Q92805	767 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	SKA1	Q96BD8	255 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	DPH1	Q9BZG8	443 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	TRIM4	Q9C037	500 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	NEUROG2	Q9H2A3	272 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	MARCH2	Q9P0N8	246 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	GGA2	Q9UJY4	613 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	SRPRB	Q9Y5M8	271 aa	Known RBP	11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	CLIC4	Q9Y696	253 aa		11.53	□□□□□ -0.56
NUP62-222	ENST00000600935	SPTAN1	Q13813	2472 aa	Known RBP	11.53	□□□□□ -0.56
NUP62-222	ENST00000600935		A0A1W2PP55	124 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.52	□□□□□ -0.57
NUP62-222	ENST00000600935		K7ENP7	123 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	MID1	O15344	667 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	LAT	O43561	262 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	SIGLEC6	O43699	453 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	PHACTR2	O75167	634 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	SIN3B	O75182	1162 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	RALA	P11233	206 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	PABPC1	P11940	636 aa	Known RBP	11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	LSS	P48449	732 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	CCR5	P51681	352 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	PPP2CB	P62714	309 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	PPP2CA	P67775	309 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	INCA1	Q0VD86	236 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	TRIP4	Q15650	581 aa	Predicted RBP	11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	MPPE1	Q53F39	396 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	SPOPL	Q6IQ16	392 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	INO80C	Q6PI98	192 aa	Predicted RBP	11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	BHLHA9	Q7RTU4	235 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	CCDC65	Q8IXS2	484 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	AHI1	Q8N157	1196 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	SLC25A45	Q8N413	288 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	EXD3	Q8N9H8	876 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	PARD3B	Q8TEW8	1205 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	CYFIP2	Q96F07	1278 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	VCPIP1	Q96JH7	1222 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	SERAC1	Q96JX3	654 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	LMLN	Q96KR4	655 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	PANK2	Q9BZ23	570 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	CAAP1	Q9H8G2	361 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	STOML2	Q9UJZ1	356 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	SCML1	Q9UN30	329 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	NOTCH2	Q04721	2471 aa		11.52	□□□□□ -0.57
NUP62-222	ENST00000600935	TEP1	Q99973	2627 aa	Known RBP	11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	SLC12A8	A0AV02	714 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	SDC3	O75056	442 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	CD70	P32970	193 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	STAT6	P42226	847 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	ADPRH	P54922	357 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	E2F1	Q01094	437 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	ZNF211	Q13398	564 aa	Predicted RBP	11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	BIRC3	Q13489	604 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	CST6	Q15828	149 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	CCDC73	Q6ZRK6	1079 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	STXBP4	Q6ZWJ1	553 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	BRAP	Q7Z569	592 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	C12orf56	Q8IXR9	622 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	LSMEM2	Q8N112	164 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	OXR1	Q8N573	874 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	AADAT	Q8N5Z0	425 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	GANC	Q8TET4	914 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	PLD4	Q96BZ4	506 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	MRGPRX3	Q96LB0	322 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	POLR1B	Q9H9Y6	1135 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	ARHGAP20	Q9P2F6	1191 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	SUN2	Q9UH99	717 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	FZD4	Q9ULV1	537 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	NCKAP1	Q9Y2A7	1128 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	KIF26B	Q2KJY2	2108 aa		11.51	□□□□□ -0.57
NUP62-222	ENST00000600935	LY6G6E	A0A0G2JKS1	128 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935		A0A1B0GVM2	712 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	LRRC72	A6NJI9	287 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	LZTS3	O60299	673 aa	Predicted RBP	11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	OPA1	O60313	960 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	USP12	O75317	370 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	RNASEH2A	O75792	299 aa	Known RBP	11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	ASS1	P00966	412 aa	Known RBP	11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	GIMD1	P0DJR0	217 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	DLG4	P78352	724 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	ARID5B	Q14865	1188 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	C9orf64	Q5T6V5	341 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	IGF2-AS	Q6U949	168 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	MMAA	Q8IVH4	418 aa	Known RBP	11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	NELFCD	Q8IXH7	590 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	MFSD2A	Q8NA29	543 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	DUSP16	Q9BY84	665 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	INTS6	Q9UL03	887 aa	Known RBP	11.5	□□□□□ -0.57
NUP62-222	ENST00000600935		U3KQA8	63 aa		11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	TDRD6	O60522	2096 aa	Known RBP	11.5	□□□□□ -0.57
NUP62-222	ENST00000600935	STX6	O43752	255 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	CS	O75390	466 aa	Known RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	CD2BP2	O95400	341 aa	Known RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	ATP5B	P06576	529 aa	Known RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	TXLNA	P40222	546 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	SNRPF	P62306	86 aa	Known RBP	11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	NFATC3	Q12968	1075 aa		11.49	□□□□□ -0.57
NUP62-222	ENST00000600935	ZACN	Q401N2	412 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms