RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 ITPR1Q14643 2758 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 O00370 1275 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 SLC16A3O15427 465 aaKnown RBP17.88■□□□□ 0.45
SMG9-210ENST00000600097 MSI1O43347 362 aaKnown RBP17.88■□□□□ 0.45
SMG9-210ENST00000600097 DFNA5O60443 496 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 FSBPO95073 299 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 ZNF202O95125 648 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 TBXAS1P24557 533 aaPredicted RBP17.88■□□□□ 0.45
SMG9-210ENST00000600097 DAOAP59103 153 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 SFSWAPQ12872 951 aaKnown RBP17.88■□□□□ 0.45
SMG9-210ENST00000600097 COL28A1Q2UY09 1125 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 INAVAQ3KP66 663 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 DCAF17Q5H9S7 520 aaPredicted RBP17.88■□□□□ 0.45
SMG9-210ENST00000600097 PIK3R6Q5UE93 754 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 USP30Q70CQ3 517 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 ADAT2Q7Z6V5 191 aaKnown RBP17.88■□□□□ 0.45
SMG9-210ENST00000600097 UBA3Q8TBC4 463 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 IRGQQ8WZA9 623 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
SMG9-210ENST00000600097 SCUBE2Q9NQ36 999 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 NCKAP1Q9Y2A7 1128 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 BTBD3Q9Y2F9 522 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 RAXQ9Y2V3 346 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 CABIN1Q9Y6J0 2220 aa17.88■□□□□ 0.45
SMG9-210ENST00000600097 APC2O95996 2303 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 TBL1XO60907 577 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 IGLV3-27P01718 113 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 ST8SIA6P61647 398 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 PKDCCQ504Y2 493 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 LCLAT1Q6UWP7 414 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 ZC3H3Q8IXZ2 948 aaKnown RBP17.87■□□□□ 0.45
SMG9-210ENST00000600097 SMYD4Q8IYR2 804 aaPredicted RBP17.87■□□□□ 0.45
SMG9-210ENST00000600097 AZIN2Q96A70 460 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 TSG101Q99816 390 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 DDX50Q9BQ39 737 aaKnown RBP17.87■□□□□ 0.45
SMG9-210ENST00000600097 RSPH9Q9H1X1 276 aaPredicted RBP17.87■□□□□ 0.45
SMG9-210ENST00000600097 RMND1Q9NWS8 449 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 ADAMTS20P59510 1910 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 PLXNB3Q9ULL4 1909 aa17.87■□□□□ 0.45
SMG9-210ENST00000600097 NUMA1Q14980 2115 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 TYW5A2RUC4 315 aaKnown RBP17.86■□□□□ 0.45
SMG9-210ENST00000600097 GOLGA8CPA6NN73 597 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 H0Y8X5 98 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 PAPSS1O43252 624 aaPredicted RBP17.86■□□□□ 0.45
SMG9-210ENST00000600097 RNASEH1O60930 286 aaKnown RBP17.86■□□□□ 0.45
SMG9-210ENST00000600097 ASLP04424 464 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 PAEPP09466 180 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 LCP1P13796 627 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 CD70P32970 193 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 CTSKP43235 329 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 SGSHP51688 502 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 RACK1P63244 317 aaKnown RBP17.86■□□□□ 0.45
SMG9-210ENST00000600097 FKBP3Q00688 224 aaKnown RBP17.86■□□□□ 0.45
SMG9-210ENST00000600097 BECN1Q14457 450 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 KIAA0895LQ68EN5 471 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 RFWD3Q6PCD5 774 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 MFN1Q8IWA4 741 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 HJURPQ8NCD3 748 aaPredicted RBP17.86■□□□□ 0.45
SMG9-210ENST00000600097 FIBINQ8TAL6 211 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 WFDC5Q8TCV5 224 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 SLC35F5Q8WV83 523 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 TTC17Q96AE7 1141 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 SKA1Q96BD8 255 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 ACE2Q9BYF1 805 aaPredicted RBP17.86■□□□□ 0.45
SMG9-210ENST00000600097 ATP6V1DQ9Y5K8 247 aa17.86■□□□□ 0.45
SMG9-210ENST00000600097 TRABD2BA6NFA1 517 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 MUC22E2RYF6 1773 aaPredicted RBP17.85■□□□□ 0.45
SMG9-210ENST00000600097 KCNK3O14649 394 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 VILLO15195 856 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 ACSL4O60488 711 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 C21orf59P57076 290 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 TBX4P57082 545 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 STILQ15468 1287 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 HNRNPA1L2Q32P51 320 aaKnown RBP17.85■□□□□ 0.45
SMG9-210ENST00000600097 COBLL1Q53SF7 1204 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 FAM133BQ5BKY9 247 aaKnown RBP17.85■□□□□ 0.45
SMG9-210ENST00000600097 LAYNQ6UX15 382 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 CCDC117Q8IWD4 279 aaPredicted RBP17.85■□□□□ 0.45
SMG9-210ENST00000600097 UBR7Q8N806 425 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 KDM1BQ8NB78 822 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 GANCQ8TET4 914 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 HNRNPLLQ8WVV9 542 aaKnown RBP17.85■□□□□ 0.45
SMG9-210ENST00000600097 PABPC3Q9H361 631 aaKnown RBP17.85■□□□□ 0.45
SMG9-210ENST00000600097 GOLPH3LQ9H4A5 285 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 FBXL12Q9NXK8 326 aa17.85■□□□□ 0.45
SMG9-210ENST00000600097 ARMCX3Q9UH62 379 aaPredicted RBP17.85■□□□□ 0.45
SMG9-210ENST00000600097 PTPRBP23467 1997 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 A0A1W2PPC4 97 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 E9PAM4 449 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 LTFP02788 710 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 IGHV4-34P06331 123 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 SLC6A4P31645 630 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 PRCPP42785 496 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 CAMK2BQ13554 666 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 ARID5BQ14865 1188 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 SMAD1Q15797 465 aaKnown RBP17.84■□□□□ 0.45
SMG9-210ENST00000600097 CNGA2Q16280 664 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 SOWAHCQ53LP3 525 aaPredicted RBP17.84■□□□□ 0.45
SMG9-210ENST00000600097 PMF1Q6P1K2 205 aa17.84■□□□□ 0.45
SMG9-210ENST00000600097 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms