RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 MRFAP1L1Q96HT8 127 aa20.2■□□□□ 0.82
SHKBP1-221ENST00000599833 SELENOOQ9BVL4 669 aa20.2■□□□□ 0.82
SHKBP1-221ENST00000599833 TRIM7Q9C029 511 aa20.2■□□□□ 0.82
SHKBP1-221ENST00000599833 TKTL2Q9H0I9 626 aa20.2■□□□□ 0.82
SHKBP1-221ENST00000599833 CD248Q9HCU0 757 aa20.2■□□□□ 0.82
SHKBP1-221ENST00000599833 FBXO4Q9UKT5 387 aa20.2■□□□□ 0.82
SHKBP1-221ENST00000599833 SNX10Q9Y5X0 201 aa20.2■□□□□ 0.82
SHKBP1-221ENST00000599833 ADAM23O75077 832 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 SLC2A3P11169 496 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 RDXP35241 583 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 GGCXP38435 758 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 SEC13P55735 322 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 DMWDQ09019 674 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 PPP1R2P3Q6NXS1 205 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 FBXL22Q6P050 247 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 TSSK4Q6SA08 328 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 STRADAQ7RTN6 431 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 ATP6V0D2Q8N8Y2 350 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 IL17RCQ8NAC3 791 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 IGSF8Q969P0 613 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 EXOC4Q96A65 974 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 MCEEQ96PE7 176 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 CHP1Q99653 195 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 SLC2A11Q9BYW1 496 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 ZDHHC4Q9NPG8 344 aa20.19■□□□□ 0.82
SHKBP1-221ENST00000599833 CCP110O43303 1012 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 TBL1XO60907 577 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 F9P00740 461 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 CYBBP04839 570 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 SDC4P31431 198 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 EIF4A3P38919 411 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 ZNF143P52747 638 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 PTPN5P54829 565 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 MRPS21P82921 87 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 ATP11AP98196 1134 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 AUHQ13825 339 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 ZNF528Q3MIS6 628 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 FSCBQ5H9T9 825 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 LGI2Q8N0V4 545 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 CFAP52Q8N1V2 620 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 ARFGAP1Q8N6T3 406 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 WDCPQ9H6R7 721 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 NEU3Q9UQ49 428 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 CKAP5Q14008 2032 aa20.18■□□□□ 0.82
SHKBP1-221ENST00000599833 CHD5Q8TDI0 1954 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 SSU72P8A0A1W2PR75 194 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 TBC1D3BA6NDS4 549 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 TMEM191CA6NGB0 347 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 LAMTOR5O43504 91 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 ABCB4P21439 1286 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 GPD1P21695 349 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 CXCL12P48061 93 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 CCR3P51677 355 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 NHLH1Q02575 133 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 C2orf27AQ580R0 203 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 C10orf76Q5T2E6 689 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 EGFLAMQ63HQ2 1017 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 SYT13Q7L8C5 426 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 ADIPOR2Q86V24 386 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 CHSY1Q86X52 802 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 CIR1Q86X95 450 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 FAM131BQ86XD5 332 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 ALLCQ8N6M5 410 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 HJURPQ8NCD3 748 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 FAM172AQ8WUF8 416 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 ACOX2Q99424 681 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 DDX50Q9BQ39 737 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 MAGEB5Q9BZ81 275 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 ZNF212Q9UDV6 495 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 INTS6Q9UL03 887 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 MMP17Q9ULZ9 603 aa20.17■□□□□ 0.82
SHKBP1-221ENST00000599833 IGLV3-10A0A075B6K4 115 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 SGK1O00141 431 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 HOXA6P31267 233 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 CD70P32970 193 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 TIE1P35590 1138 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 GFPT1Q06210 699 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 ENPP2Q13822 863 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 CDO1Q16878 200 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 MANEALQ5VSG8 457 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 CXorf57Q6NSI4 855 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 TMEM92Q6UXU6 159 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 CYP4V2Q6ZWL3 525 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 CCDC185Q8N715 623 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 OR52K2Q8NGK3 314 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 FIBINQ8TAL6 211 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 KCNV2Q8TDN2 545 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 ARHGEF26Q96DR7 871 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 C1orf74Q96LT6 269 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 PHOX2BQ99453 314 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 THAP2Q9H0W7 228 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 PARVAQ9NVD7 372 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 TMEM51Q9NW97 253 aa20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 CNOT8Q9UFF9 292 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-221ENST00000599833 DRGXA6NNA5 263 aa20.15■□□□□ 0.82
SHKBP1-221ENST00000599833 AKR1B15C9JRZ8 316 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-221ENST00000599833 F5H5T6 163 aa20.15■□□□□ 0.82
SHKBP1-221ENST00000599833 LUC7L3O95232 432 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-221ENST00000599833 ADRA1BP35368 520 aa20.15■□□□□ 0.82
SHKBP1-221ENST00000599833 CSTF1Q05048 431 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms